RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	LINC01549	A6NIU2	74 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	WISP3	O95389	354 aa	Predicted RBP	11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	ESD	P10768	282 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	ZNF138	P52744	262 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	TMEM178B	H3BS89	294 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	SSBP2	P81877	361 aa	Predicted RBP	11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	IL18BP	O95998	194 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	OVOL2	Q9BRP0	275 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	MSRB2	Q9Y3D2	182 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	DMRT1	Q9Y5R6	373 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	LRRK1	Q38SD2	2015 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	TRAV5	A0A0B4J249	113 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	RASL11A	Q6T310	242 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	LOC285556	D6RIA3	1793 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	PINLYP	A6NC86	204 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	APOC4	P55056	127 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672	EFNB3	Q15768	340 aa		11.43	□□□□□ -0.58
NRXN1-222	ENST00000625672		A8MXK9	166 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	GGTLC1	Q9BX51	225 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	SRP19	P09132	144 aa	Known RBP	11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	CSTL1	Q9H114	145 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	DUT	P33316	252 aa	Known RBP	11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	BPESC1	Q9GZL8	116 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	GREB1	Q4ZG55	1949 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672		F8VVB4	439 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672		F8VWA3	439 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	VCY	O14598	125 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	GREM1	O60565	184 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	LINC00477	Q96M19	166 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	CD59	P13987	128 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	XIRP1	Q702N8	1843 aa	Known RBP	11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672	PRIMA1	Q86XR5	153 aa		11.42	□□□□□ -0.58
NRXN1-222	ENST00000625672		A0A087WWL8	130 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	C1QTNF9	P0C862	333 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	RPL23	P62829	140 aa	Known RBP	11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	IGKV1D-13	A0A0B4J2D9	117 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672		M0R1W7	72 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	TCRA	P04437	139 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	IGKV1-13	P0DP09	117 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	TCF20	Q9UGU0	1960 aa	Known RBP	11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	RMI2	Q96E14	147 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	C18orf12	Q96KH6	178 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	LINC00271	P0C7V0	271 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672	PTPRF	P10586	1907 aa		11.41	□□□□□ -0.58
NRXN1-222	ENST00000625672		D6R8Y8	96 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	NDUFS5	O43920	106 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	DEFB131A	P59861	70 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	PCP4	P48539	62 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672		Q0VFX4	171 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	C10orf55	Q5SWW7	151 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	CD200R1L	Q6Q8B3	271 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	C9orf139	Q6ZV77	190 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	CHCHD1	Q96BP2	118 aa	Known RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	CACNA1B	Q00975	2339 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672		A0A1W2PRE2	83 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	MBD3L4	A6NDZ8	208 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	MBD3L3	A6NE82	208 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	MBD3L5	A6NJ08	208 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672		H3BMM0	161 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	PRTN3	P24158	256 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	UBE2W	Q96B02	151 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	XCL2	Q9UBD3	114 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672		Q5BKY6	102 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	KLF17	Q5JT82	389 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	C14orf178	Q8N769	122 aa	Predicted RBP	11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	TGFBR3L	H3BV60	316 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	TNFRSF6B	O95407	300 aa		11.4	□□□□□ -0.58
NRXN1-222	ENST00000625672	MYMX	A0A1B0GTQ4	84 aa		11.4	□□□□□ -0.59
NRXN1-222	ENST00000625672	RHPN1-AS1	Q9BWJ2	59 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	TRAV25	A0A0B4J276	109 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	OOSP1	A8MZH6	123 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	ZNF479	Q96JC4	524 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	SPX	Q9BT56	116 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	OSTC	Q9NRP0	149 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	TRAV8-3	A0A0A6YYJ7	113 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	SAA4	P35542	130 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	GAGE13	Q4V321	117 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	SAMD5	Q5TGI4	173 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	C5orf64	Q2M2E5	130 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	C2orf82	Q6UX34	121 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	DOCK4	Q8N1I0	1966 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	RUSC1-AS1	Q66K80	236 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	C1orf122	Q6ZSJ8	110 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	LINC01619	G3V211	115 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	BUB1B-PAK6	H3BSN5	160 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	LY6H	O94772	140 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	NHLRC3	Q5JS37	347 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672		Q8TAT8	98 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	TSKU	Q8WUA8	353 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	TET1	Q8NFU7	2136 aa		11.39	□□□□□ -0.59
NRXN1-222	ENST00000625672	SELL	P14151	372 aa		11.38	□□□□□ -0.59
NRXN1-222	ENST00000625672	IGLV3-19	P01714	112 aa		11.38	□□□□□ -0.59
NRXN1-222	ENST00000625672	OCIAD2	Q56VL3	154 aa		11.38	□□□□□ -0.59
NRXN1-222	ENST00000625672	GAGE2A	Q6NT46	116 aa		11.38	□□□□□ -0.59
NRXN1-222	ENST00000625672	TIMM21	Q9BVV7	248 aa		11.38	□□□□□ -0.59
NRXN1-222	ENST00000625672	DKK4	Q9UBT3	224 aa		11.38	□□□□□ -0.59
NRXN1-222	ENST00000625672	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms