RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 PSMG4Q5JS54 123 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM42Q69YG0 159 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 NUP35Q8NFH5 326 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 LINC00479Q96M42 142 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 C15orf62A8K5M9 175 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 PMS2P5A8MQ11 134 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 LYNX1G3V0Z9 82 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 WISP1O95388 367 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 LYNX1P0DP58 116 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 RNASE4P34096 147 aaKnown RBP4.64□□□□□ -1.67
ERCC6-213ENST00000624341 HSD52Q0P140 79 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 ATP5L2Q7Z4Y8 100 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 OR5A1Q8NGJ0 315 aa4.64□□□□□ -1.67
ERCC6-213ENST00000624341 TRAV8-1A0A0A6YYK1 113 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV3-11P01762 117 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 CDKN1AP38936 164 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 GTSCR1Q86UQ5 136 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 ARFGEF3Q5TH69 2177 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 A0A0G2JLM5 398 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 FAM90A9PA6NNJ1 464 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 D6R8Y8 96 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SP9P0CG40 484 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 PSG1P11464 419 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 NBL1P41271 181 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SNRPD3P62318 126 aaKnown RBP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 BCL6BQ8N143 479 aaPredicted RBP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 PIMREGQ9BSJ6 248 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 MS4A6AQ9H2W1 248 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 YAE1D1Q9NRH1 226 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV1-18A0A0C4DH31 117 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 PRR19A6NJB7 356 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV2-5P01817 119 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM95Q3KNT9 176 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 NXT2Q9NPJ8 142 aaKnown RBP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 TNFRSF18Q9Y5U5 241 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV1-6A0A0C4DH72 117 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SRRM5B3KS81 715 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 NBR2O15453 112 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 IGKCP01834 107 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 CD177Q8N6Q3 437 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 C8orf46Q8TAG6 207 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 RAX2Q96IS3 184 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SCRT1Q9BWW7 348 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 TMEM133Q9H2Q1 129 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 LIME1Q9H400 295 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SPRR3Q9UBC9 169 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 RPUSD1Q9UJJ7 312 aaKnown RBP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SYS1-DBNDD2H3BUS1 97 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 PDLIM4P50479 330 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SRSF1Q07955 248 aaKnown RBP eCLIP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 CD300EQ496F6 205 aaPredicted RBP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 C1orf147Q96MC9 270 aaPredicted RBP4.63□□□□□ -1.67
ERCC6-213ENST00000624341 DUX5Q96PT3 197 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 ASCL2Q99929 193 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 SPOCK3Q9BQ16 436 aa4.63□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV3D-20A0A0C4DH25 116 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 NPFFO15130 113 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV4-39P01824 125 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 PPBPP02775 128 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 TCRAP04437 139 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 CSRP2Q16527 193 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 PVRIGQ6DKI7 326 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 Q6P435 159 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 SLC25A48Q6ZT89 311 aaKnown RBP4.62□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV2-40A0A087WW87 121 aaPredicted RBP4.62□□□□□ -1.67
ERCC6-213ENST00000624341 MLNRO43193 412 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 IL18BPO95998 194 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 IGKV2D-40P01614 121 aaPredicted RBP4.62□□□□□ -1.67
ERCC6-213ENST00000624341 GAGE13Q4V321 117 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 ZNF524Q96C55 264 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 VGLL1Q99990 258 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 TRAV12-3A0A0B4J271 114 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 GAGE12BA1L429 117 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 NPSP0C0P6 89 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 ERVK11-1P61568 191 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 TCF15Q12870 199 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 LYZL1Q6UWQ5 148 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 GTSF1LQ9H1H1 148 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 TIMM23O14925 209 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 CFPP27918 469 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 PAX9P55771 341 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 C10orf91Q5T1B1 145 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 TOMM7Q9P0U1 55 aa4.62□□□□□ -1.67
ERCC6-213ENST00000624341 TRAV2A0A0B4J234 112 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV1-46P01743 117 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 KLF17Q5JT82 389 aaPredicted RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 OR9G4Q8NGQ1 327 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 H7C1H1 209 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 CD7P09564 240 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 ATP5J2P56134 94 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 ZFP36L1Q07352 338 aaKnown RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 WFDC12Q8WWY7 111 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 COPS9Q8WXC6 57 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 CYYR1Q96J86 154 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 ANAPC13Q9BS18 74 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 MRPS16Q9Y3D3 137 aaKnown RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 CHTOPQ9Y3Y2 248 aaKnown RBP4.61□□□□□ -1.67
ERCC6-213ENST00000624341 IGHV3-64A0A075B6Q5 118 aa4.61□□□□□ -1.67
ERCC6-213ENST00000624341 TRBV6-6A0A0A6YYG2 114 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms