RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ADGRG4Q8IZF6 3080 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 TEX50A0A1B0GTY4 177 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 MGST3O14880 152 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 ABHD17BQ5VST6 288 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 HCP5Q6MZN7 132 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 C16orf54Q6UWD8 224 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 NDFIP1Q9BT67 221 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 ZNF257Q9Y2Q1 563 aa12.27□□□□□ -0.45
PMS1-221ENST00000624204 K7ERJ3 54 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 RNASE2P10153 161 aaKnown RBP12.26□□□□□ -0.45
PMS1-221ENST00000624204 OR5A1Q8NGJ0 315 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 FXYD5Q96DB9 178 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 SIGMAR1Q99720 223 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 hADV38S2A0JD32 116 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 SRRM4A7MD48 611 aaKnown RBP12.26□□□□□ -0.45
PMS1-221ENST00000624204 FAM106CPP0CH98 169 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 FAM106AQ4KMX7 169 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 PATE2Q6UY27 113 aa12.26□□□□□ -0.45
PMS1-221ENST00000624204 F2RL2O00254 374 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 CACNG7P62955 275 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 HSD52Q0P140 79 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 PRNTQ86SH4 94 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 CIARTQ8N365 385 aaPredicted RBP12.25□□□□□ -0.45
PMS1-221ENST00000624204 OR1L4Q8NGR5 311 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 SPRY3O43610 288 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 DHRS13Q6UX07 377 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 PPP1R35Q8TAP8 253 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 UPK2O00526 184 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 FGF6P10767 208 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 C2orf83Q53S99 150 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 TIMM23BQ5SRD1 257 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 SAMD5Q5TGI4 173 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 SVIPQ8NHG7 77 aa12.25□□□□□ -0.45
PMS1-221ENST00000624204 SOX21Q9Y651 276 aaPredicted RBP12.25□□□□□ -0.45
PMS1-221ENST00000624204 A0A1B0GV72 72 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 TSSC4Q9Y5U2 329 aaPredicted RBP12.24□□□□□ -0.45
PMS1-221ENST00000624204 IGHV3-72A0A0B4J1Y9 119 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 PSMB11A5LHX3 300 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 HOXC12P31275 282 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 ITLN1Q8WWA0 313 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 M0R296 226 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 SMAD7O15105 426 aaKnown RBP12.24□□□□□ -0.45
PMS1-221ENST00000624204 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
PMS1-221ENST00000624204 ZNF788Q6ZQV5 615 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 SAP25Q8TEE9 199 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 PIEZO2Q9H5I5 2752 aa12.24□□□□□ -0.45
PMS1-221ENST00000624204 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
PMS1-221ENST00000624204 LOXL1Q08397 574 aaPredicted RBP12.23□□□□□ -0.45
PMS1-221ENST00000624204 UBALD2Q8IYN6 164 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 ZADH2Q8N4Q0 377 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 SAA1P0DJI8 122 aaPredicted RBP12.23□□□□□ -0.45
PMS1-221ENST00000624204 C9orf172C9J069 976 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 FCGR2BP31994 310 aaPredicted RBP12.23□□□□□ -0.45
PMS1-221ENST00000624204 PSG3Q16557 428 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 ZNF714Q96N38 554 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
PMS1-221ENST00000624204 DLL1O00548 723 aa12.22□□□□□ -0.45
PMS1-221ENST00000624204 ENSAO43768 121 aaKnown RBP12.22□□□□□ -0.45
PMS1-221ENST00000624204 APOBEC3AP31941 199 aaPredicted RBP12.22□□□□□ -0.45
PMS1-221ENST00000624204 SPRNQ5BIV9 151 aa12.22□□□□□ -0.45
PMS1-221ENST00000624204 SRSF12Q8WXF0 261 aaKnown RBP12.22□□□□□ -0.45
PMS1-221ENST00000624204 MOGAT3Q86VF5 341 aa12.22□□□□□ -0.45
PMS1-221ENST00000624204 MLST8Q9BVC4 326 aa12.22□□□□□ -0.45
PMS1-221ENST00000624204 SH3BGRL2Q9UJC5 107 aa12.22□□□□□ -0.45
PMS1-221ENST00000624204 CEP192Q8TEP8 1941 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 SMIM17P0DL12 118 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 ADAMTSL5Q6ZMM2 481 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 BOD1L2Q8IYS8 172 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 OR1L8Q8NGR8 309 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 SPTA1P02549 2419 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 A0A1B0GUT8 65 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 IGHV1-2P23083 117 aa12.21□□□□□ -0.45
PMS1-221ENST00000624204 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 PPIAL4EA0A075B759 164 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 E7EUB6 86 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 SMKR1H3BMG3 65 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 SMIM13P0DJ93 91 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 PPIAL4FP0DN26 164 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 CFHR2P36980 270 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 MRPL36Q9P0J6 103 aaKnown RBP12.21□□□□□ -0.46
PMS1-221ENST00000624204 INSIG2Q9Y5U4 225 aa12.21□□□□□ -0.46
PMS1-221ENST00000624204 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 C19orf71A6NCJ1 209 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 ATP1A1-AS1Q5TC04 95 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 OR9G4Q8NGQ1 327 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 CACNG8Q8WXS5 425 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 GOLT1AQ6ZVE7 132 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 ATP6V0BQ99437 205 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 Q9H3A6 140 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 S4R3C0 116 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 GAGE12HA6NDE8 117 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 TCRAP04437 139 aa12.2□□□□□ -0.46
PMS1-221ENST00000624204 CT83Q5H943 113 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms