RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 NHLH1Q02575 133 aa9.49□□□□□ -0.89
TP53-227ENST00000622645 NUP35Q8NFH5 326 aa9.49□□□□□ -0.89
TP53-227ENST00000622645 HSPB9Q9BQS6 159 aa9.49□□□□□ -0.89
TP53-227ENST00000622645 SLC25A39Q9BZJ4 359 aaPredicted RBP9.49□□□□□ -0.89
TP53-227ENST00000622645 CHD8Q9HCK8 2581 aa9.49□□□□□ -0.89
TP53-227ENST00000622645 A0A1W2PPR1 153 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 K7EIM0 57 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 TOX4O94842 621 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 SRIP30626 198 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 PAFAH1B2P68402 229 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 LINC00322Q6ZN03 302 aaPredicted RBP9.48□□□□□ -0.89
TP53-227ENST00000622645 GPR82Q96P67 336 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 RCHY1Q96PM5 261 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 TBX15Q96SF7 602 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 SAMD10Q9BYL1 202 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 NDUFS7O75251 213 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 PRB4P10163 310 aaPredicted RBP9.48□□□□□ -0.89
TP53-227ENST00000622645 SSTP61278 116 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 SLAQ13239 276 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 C5orf17Q8NAS9 161 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 ATG101Q9BSB4 218 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 ZNF331Q9NQX6 463 aaPredicted RBP9.48□□□□□ -0.89
TP53-227ENST00000622645 ZNF586Q9NXT0 402 aa9.48□□□□□ -0.89
TP53-227ENST00000622645 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 ZNF253O75346 499 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 HLA-DQA1P01909 254 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 TCRAP04437 139 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 PRTN3P24158 256 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 PRR31Q5SQ13 230 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 EXOC3-AS1Q8N2X6 119 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 NEU1Q99519 415 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 WNK2Q9Y3S1 2297 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 TRAV8-1A0A0A6YYK1 113 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 A6NNC1 897 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 HIGD1CA8MV81 97 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 APCSP02743 223 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 CDKN1AP38936 164 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 CEACAM3P40198 252 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 COX19Q49B96 90 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 LBHQ53QV2 105 aaPredicted RBP9.47□□□□□ -0.89
TP53-227ENST00000622645 GDF5OSQ5U4N7 250 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 TOMM20LQ6UXN7 152 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 DYNAPQ8N1N2 210 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 MLST8Q9BVC4 326 aa9.47□□□□□ -0.89
TP53-227ENST00000622645 ODF3BA8MYP8 253 aa9.46□□□□□ -0.89
TP53-227ENST00000622645 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.89
TP53-227ENST00000622645 LY6DQ14210 128 aa9.46□□□□□ -0.89
TP53-227ENST00000622645 TDRG1Q3Y452 100 aa9.46□□□□□ -0.89
TP53-227ENST00000622645 TSKUQ8WUA8 353 aa9.46□□□□□ -0.89
TP53-227ENST00000622645 NEU4Q8WWR8 484 aaPredicted RBP9.46□□□□□ -0.89
TP53-227ENST00000622645 MRPL27Q9P0M9 148 aaKnown RBP9.46□□□□□ -0.89
TP53-227ENST00000622645 RNF114Q9Y508 228 aa9.46□□□□□ -0.89
TP53-227ENST00000622645 M0R1W7 72 aa9.46□□□□□ -0.9
TP53-227ENST00000622645 BRS3P32247 399 aa9.46□□□□□ -0.9
TP53-227ENST00000622645 CAMPP49913 170 aa9.46□□□□□ -0.9
TP53-227ENST00000622645 Q71RC1 249 aaPredicted RBP9.46□□□□□ -0.9
TP53-227ENST00000622645 NPBQ8NG41 125 aa9.46□□□□□ -0.9
TP53-227ENST00000622645 C17orf77Q96MU5 243 aa9.46□□□□□ -0.9
TP53-227ENST00000622645 RBM14Q96PK6 669 aaKnown RBP9.46□□□□□ -0.9
TP53-227ENST00000622645 SNHG12Q9BXW3 62 aa9.46□□□□□ -0.9
TP53-227ENST00000622645 HIVEP3Q5T1R4 2406 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 KIR2DL5BA0A0G2JN68 375 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 KIR2DL5BA0A0G2JPC4 375 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 NDUFA3O95167 84 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 TOMM40O96008 361 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 LTAP01374 205 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 GPX1P07203 203 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
TP53-227ENST00000622645 OR10J3Q5JRS4 329 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 TCF24Q7RTU0 167 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 KIR2DL5AQ8N109 375 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 KIR3DL3Q8N743 410 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 SRSF8Q9BRL6 282 aaKnown RBP9.45□□□□□ -0.9
TP53-227ENST00000622645 SSBP4Q9BWG4 385 aaPredicted RBP9.45□□□□□ -0.9
TP53-227ENST00000622645 AKAP6Q13023 2319 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 NCBP2LA6PVI3 153 aaKnown RBP9.45□□□□□ -0.9
TP53-227ENST00000622645 C5orf64Q2M2E5 130 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 BCL6BQ8N143 479 aaPredicted RBP9.45□□□□□ -0.9
TP53-227ENST00000622645 SIGLECL1Q8N7X8 197 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 FMC1Q96HJ9 113 aa9.45□□□□□ -0.9
TP53-227ENST00000622645 A0A1W2PS18 150 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 GPR6P46095 362 aaPredicted RBP9.44□□□□□ -0.9
TP53-227ENST00000622645 AMTP48728 403 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 ZNF491Q8N8L2 437 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 TBL2Q9Y4P3 447 aaKnown RBP9.44□□□□□ -0.9
TP53-227ENST00000622645 IL4P05112 153 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 PMCHP20382 165 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 NDPQ00604 133 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 GOLT1AQ6ZVE7 132 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 VN1R17PQ8TDU5 208 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 WIPF2Q8TF74 440 aaPredicted RBP9.44□□□□□ -0.9
TP53-227ENST00000622645 CHRDL1Q9BU40 450 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 OTORQ9NRC9 128 aa9.44□□□□□ -0.9
TP53-227ENST00000622645 TMEM14CQ9P0S9 112 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms