RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 Q9H3A6 140 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 GSX1Q9H4S2 264 aaPredicted RBP7.47□□□□□ -1.21
PDPN-212ENST00000621990 OTORQ9NRC9 128 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 ZNF492Q9P255 531 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 C19orf71A6NCJ1 209 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 LY6HO94772 140 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 APCSP02743 223 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 BTF3P20290 206 aaKnown RBP7.47□□□□□ -1.21
PDPN-212ENST00000621990 MMDQ15546 238 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 KCNS1Q96KK3 526 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
PDPN-212ENST00000621990 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
PDPN-212ENST00000621990 LOC105371242A0A075B767 164 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 TRBV6-1A0A0K0K1D8 114 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 A0A1B0GXF2 115 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 SLAQ13239 276 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 PLGLAQ15195 96 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 GDF5OSQ5U4N7 250 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 LEMD1Q68G75 181 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 DTX2Q86UW9 622 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 KIR3DL3Q8N743 410 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 TMEM68Q96MH6 324 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 HSPB9Q9BQS6 159 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 ZNF331Q9NQX6 463 aaPredicted RBP7.46□□□□□ -1.21
PDPN-212ENST00000621990 ZNF586Q9NXT0 402 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 IGF2RP11717 2491 aa7.46□□□□□ -1.21
PDPN-212ENST00000621990 SPTA1P02549 2419 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 OR2J3O76001 311 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 SRIP30626 198 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 ARF6P62330 175 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 ASPHD1Q5U4P2 390 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 LHFPL4Q7Z7J7 247 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 LINC00469Q8N7U9 141 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 ZNF48Q96MX3 618 aaPredicted RBP7.46□□□□□ -1.22
PDPN-212ENST00000621990 RCHY1Q96PM5 261 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 NEU1Q99519 415 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 C2orf88Q9BSF0 95 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 SHANK2-AS3Q9BTD1 123 aa7.46□□□□□ -1.22
PDPN-212ENST00000621990 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
PDPN-212ENST00000621990 A0A1W2PS18 150 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 VWC2LB2RUY7 222 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 NPIPB6E9PJ23 425 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 IGLV2-11P01706 119 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 SNRPCP09234 159 aaKnown RBP7.45□□□□□ -1.22
PDPN-212ENST00000621990 GPR6P46095 362 aaPredicted RBP7.45□□□□□ -1.22
PDPN-212ENST00000621990 LYZP61626 148 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 KLF5Q13887 457 aaPredicted RBP7.45□□□□□ -1.22
PDPN-212ENST00000621990 KIAA1644Q3SXP7 199 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 LINC00322Q6ZN03 302 aaPredicted RBP7.45□□□□□ -1.22
PDPN-212ENST00000621990 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
PDPN-212ENST00000621990 TPRP12270 2363 aaKnown RBP7.45□□□□□ -1.22
PDPN-212ENST00000621990 ABCA4P78363 2273 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 NPIPB5A8MRT5 1133 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 H3BRN7 92 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 CNIH1O95406 144 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 IGLC2P0DOY2 106 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 C5orf64Q2M2E5 130 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 Q8N6K4 173 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 TBX15Q96SF7 602 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 SAMD10Q9BYL1 202 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 GFRA4Q9GZZ7 299 aa7.45□□□□□ -1.22
PDPN-212ENST00000621990 WI2-2373I1.2A0A1W2PRP0 233 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 OOSP1A8MZH6 123 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 ZNF253O75346 499 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 CDKN1AP38936 164 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 FBLN7Q53RD9 439 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 PRR27Q6MZM9 219 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 Q86TA4 180 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 SIGLECL1Q8N7X8 197 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 Q8N976 141 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 C20orf144Q9BQM9 153 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 RNF24Q9Y225 148 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 HILPDAQ9Y5L2 63 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 SOX21Q9Y651 276 aaPredicted RBP7.44□□□□□ -1.22
PDPN-212ENST00000621990 IGLV11-55A0A075B6I3 123 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 TRBV19A0A075B6N1 114 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 MRPS12O15235 138 aaKnown RBP7.44□□□□□ -1.22
PDPN-212ENST00000621990 ZNF324O75467 553 aaPredicted RBP7.44□□□□□ -1.22
PDPN-212ENST00000621990 CD33P20138 364 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 KLRD1Q13241 179 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 EBI3Q14213 229 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 CFAP161Q6P656 301 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 ZNF562Q6V9R5 426 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 LYPD1Q8N2G4 141 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 ZNF491Q8N8L2 437 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
PDPN-212ENST00000621990 TBL2Q9Y4P3 447 aaKnown RBP7.44□□□□□ -1.22
PDPN-212ENST00000621990 CCDC144NLQ6NUI1 221 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 TOMM20LQ6UXN7 152 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 GTSF1Q8WW33 167 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 RNF114Q9Y508 228 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 A8MWL6 223 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 MINOS1Q5TGZ0 78 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 TTC9CQ8N5M4 171 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 RNF125Q96EQ8 232 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 SGK494Q96LW2 274 aa7.43□□□□□ -1.22
PDPN-212ENST00000621990 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms