RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ABHD17AQ96GS6 310 aa8.71□□□□□ -1.01
CDH1-214ENST00000621016 PLEKHA3Q9HB20 300 aa8.71□□□□□ -1.01
CDH1-214ENST00000621016 TIMM9Q9Y5J7 89 aa8.71□□□□□ -1.01
CDH1-214ENST00000621016 TRGV10A0A0A0MS01 117 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 TSPAN13O95857 204 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 CCL3L1P16619 93 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 CRYBB3P26998 211 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 CAMPP49913 170 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 FOXL1Q12952 345 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 SEM1Q6ZVN7 128 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 BPIFA4PQ86YQ2 179 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 PPDPFQ9H3Y8 114 aa8.71□□□□□ -1.02
CDH1-214ENST00000621016 TET2Q6N021 2002 aaPredicted RBP8.71□□□□□ -1.02
CDH1-214ENST00000621016 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 SRRM5B3KS81 715 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 J3QR06 171 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 REG1AP05451 166 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 LOXL3P58215 753 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 EFNB3Q15768 340 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 C10orf55Q5SWW7 151 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 TEPPQ6URK8 271 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 SSBP3Q9BWW4 388 aaPredicted RBP8.7□□□□□ -1.02
CDH1-214ENST00000621016 RNASE7Q9H1E1 156 aaKnown RBP8.7□□□□□ -1.02
CDH1-214ENST00000621016 K7ERJ3 54 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 FCGR2BP31994 310 aaPredicted RBP8.7□□□□□ -1.02
CDH1-214ENST00000621016 Q0VG73 95 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 EIF4EBP1Q13541 118 aaPredicted RBP8.7□□□□□ -1.02
CDH1-214ENST00000621016 ZADH2Q8N4Q0 377 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 OR9G1Q8NH87 305 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 MRPL16Q9NX20 251 aaKnown RBP8.7□□□□□ -1.02
CDH1-214ENST00000621016 HSPB8Q9UJY1 196 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 H3BTX0 84 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 ENSAO43768 121 aaKnown RBP8.7□□□□□ -1.02
CDH1-214ENST00000621016 IGF2-ASQ6U949 168 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 VSTM2AQ8TAG5 236 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 DDB2Q92466 427 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 LINC00479Q96M42 142 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 SLC25A15Q9Y619 301 aa8.7□□□□□ -1.02
CDH1-214ENST00000621016 KMT2EQ8IZD2 1858 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 TRAV5A0A0B4J249 113 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 SRRM4A7MD48 611 aaKnown RBP8.69□□□□□ -1.02
CDH1-214ENST00000621016 FABP2P12104 132 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 ZNF138P52744 262 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 RPEL1Q2QD12 228 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 Q8N7P7 452 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 JPT1Q9UK76 154 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 SPTBN4Q9H254 2564 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 ANKHD1Q8IWZ3 2542 aaKnown RBP8.69□□□□□ -1.02
CDH1-214ENST00000621016 KLK10O43240 276 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 GCHFRP30047 84 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 GAGE5Q13069 117 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 GAGE6Q13070 117 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 MBNL2Q5VZF2 373 aaKnown RBP8.69□□□□□ -1.02
CDH1-214ENST00000621016 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 DCHS2Q6V1P9 2916 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 CXorf1O96002 111 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 IGHG3P01860 377 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 PRTN3P24158 256 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 LGALS4P56470 323 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 DIAPH2-AS1Q14236 149 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 EAF1Q96JC9 268 aaPredicted RBP8.69□□□□□ -1.02
CDH1-214ENST00000621016 TMEM70Q9BUB7 260 aa8.69□□□□□ -1.02
CDH1-214ENST00000621016 J3QR89 54 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 SFTA2Q6UW10 78 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 TEX45Q8NA69 505 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 COMMD5Q9GZQ3 224 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 CSN3P07498 182 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 VDAC2P45880 294 aaPredicted RBP8.68□□□□□ -1.02
CDH1-214ENST00000621016 HSPE1P61604 102 aaKnown RBP8.68□□□□□ -1.02
CDH1-214ENST00000621016 C17orf58Q2M2W7 97 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 TCTEX1D4Q5JR98 221 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 PRR7Q8TB68 274 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 GLMPQ8WWB7 406 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 RNF7Q9UBF6 113 aa8.68□□□□□ -1.02
CDH1-214ENST00000621016 PSMB11A5LHX3 300 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 H3BMG7 143 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 HLA-DRB1P01911 266 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 RHOBP62745 196 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 OR10X1Q8NGY0 326 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 A0A1W2PPM0 123 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 LINC00869P0C866 280 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 OPRK1P41145 380 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 NABP2Q9BQ15 211 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 IL36BQ9NZH7 164 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 SPG11Q96JI7 2443 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 A4D1N5 150 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 K7EN84 100 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 APCSP02743 223 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 SAMD5Q5TGI4 173 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
CDH1-214ENST00000621016 C18orf32Q8TCD1 76 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 KCNIP2Q9NS61 270 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
CDH1-214ENST00000621016 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
CDH1-214ENST00000621016 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms