RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CX3CL1P78423 397 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 ECSCRQ19T08 205 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 TMEM219Q86XT9 240 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 STPG4Q8N801 248 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 OR5AU1Q8NGC0 362 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 RASL11BQ9BPW5 248 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 DERL1Q9BUN8 251 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 SCO2A0A1W2PP80 73 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 F6UZH7 168 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 CORTO00230 105 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 GCGP01275 180 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 IGHV3-23P01764 117 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 LYZP61626 148 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 SELENOTP62341 195 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 UBE2L3P68036 154 aaKnown RBP7.89□□□□□ -1.15
VTA1-205ENST00000620996 YPEL4Q96NS1 127 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 NAT8Q9UHE5 227 aa7.89□□□□□ -1.15
VTA1-205ENST00000620996 CENPVL3A0A0U1RRI6 287 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 NDUFS8O00217 210 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 VAMP3Q15836 100 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 C1orf194Q5T5A4 169 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 MORN5Q5VZ52 161 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 PIP4P2Q8N4L2 257 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 C7orf69Q9H7B7 122 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 TBL2Q9Y4P3 447 aaKnown RBP7.88□□□□□ -1.15
VTA1-205ENST00000620996 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 PYYP10082 97 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 DNLZQ5SXM8 178 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 GBGT1Q8N5D6 347 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 TMUB1Q9BVT8 246 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 NAGKQ9UJ70 344 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 PDE6DO43924 150 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 C8orf88P0DMB2 117 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 HINT1P49773 126 aaPredicted RBP7.88□□□□□ -1.15
VTA1-205ENST00000620996 NDPQ00604 133 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 TIGITQ495A1 244 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 NPBQ8NG41 125 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 BLNKQ8WV28 456 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 SDF2L1Q9HCN8 221 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
VTA1-205ENST00000620996 IGKV1D-37A0A075B6S9 117 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 SRSF1Q07955 248 aaKnown RBP eCLIP7.87□□□□□ -1.15
VTA1-205ENST00000620996 LY6EQ16553 131 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 TMEM18Q96B42 140 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 A0A0U1RQK1 487 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 H3BTX0 84 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 NDUFA3O95167 84 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 PNRC1Q12796 327 aaPredicted RBP7.87□□□□□ -1.15
VTA1-205ENST00000620996 Q56UQ5 140 aa7.87□□□□□ -1.15
VTA1-205ENST00000620996 SOX21Q9Y651 276 aaPredicted RBP7.87□□□□□ -1.15
VTA1-205ENST00000620996 OR2J3O76001 311 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 NDUFB8O95169 186 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 NPPCP23582 126 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 ZNF114Q8NC26 417 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 VN1R17PQ8TDU5 208 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 MS4A10Q96PG2 267 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 PAXXQ9BUH6 204 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 TMEM167BQ9NRX6 74 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 HIF1ANQ9NWT6 349 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 HYPMO75409 117 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 IGHV4-38-2P0DP08 117 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 RPL23P62829 140 aaKnown RBP7.86□□□□□ -1.15
VTA1-205ENST00000620996 SUMO1P63165 101 aaKnown RBP7.86□□□□□ -1.15
VTA1-205ENST00000620996 ZNF562Q6V9R5 426 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 PQLC2Q6ZP29 291 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 GNG7O60262 68 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 MSMBP08118 114 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 PATE2Q6UY27 113 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 C16orf82Q7Z2V1 217 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 THAP8Q8NA92 274 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 HSPB9Q9BQS6 159 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 CELSR2Q9HCU4 2923 aa7.86□□□□□ -1.15
VTA1-205ENST00000620996 IGHV1-69DA0A0B4J2H0 117 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 IGHV1-69P01742 117 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 CRYBB3P26998 211 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 UBE2V1Q13404 147 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 TXN2Q99757 166 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 C19orf24Q9BVV8 132 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 SLC25A2Q9BXI2 301 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 MRPL32Q9BYC8 188 aaKnown RBP7.85□□□□□ -1.15
VTA1-205ENST00000620996 LINC00527Q9UJ94 153 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 ABCA12Q86UK0 2595 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 H7BYZ3 331 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 PSG1P11464 419 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 KRTAP10-9P60411 292 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 Q8N9W7 124 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 TMEM116Q8NCL8 245 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 TRGV9Q99603 122 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 CELSR1Q9NYQ6 3014 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 CSMD2Q7Z408 3487 aa7.85□□□□□ -1.15
VTA1-205ENST00000620996 IGHV3-35A0A0C4DH35 117 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 B4DEV8 164 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 I3L2K1 104 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 PAX8Q06710 450 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 ZNF503Q96F45 646 aa7.84□□□□□ -1.15
VTA1-205ENST00000620996 ZC2HC1AQ96GY0 325 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms