RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 C3orf56Q8N813 242 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 OSR1Q8TAX0 266 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 PRSS22Q9GZN4 317 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 IFI27L2Q9H2X8 130 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 ZNF256Q9Y2P7 627 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 RBFOX2O43251 390 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 SAP30O75446 220 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 NBL1P41271 181 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 CA7P43166 264 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 RPL15P61313 204 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 MLANAQ16655 118 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 C19orf54Q5BKX5 351 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM200BQ69YZ2 307 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 MIR17HGQ75NE6 70 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 KCNS1Q96KK3 526 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 LINC00473A8K010 186 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 UBE2L6O14933 153 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 GPX4P36969 197 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 VDAC2P45880 294 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 LCNL1Q6ZST4 164 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 LURAP1LQ8IV03 231 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 MYOZ3Q8TDC0 251 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 PRDM13Q9H4Q3 707 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 A0A0G2JLM5 398 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 GCGP01275 180 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 DUX4L9Q6RFH8 374 aaPredicted RBP6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 OR1P1Q8NH06 330 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 C5orf30Q96GV9 206 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 COQ2Q96H96 371 aa6.77□□□□□ -1.33
PTPDC1-204ENST00000620992 TRAV3A0A0B4J244 114 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 RPL35AP18077 110 aaKnown RBP6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 ATP5G3P48201 142 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 PRSS8Q16651 343 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 FAM162BQ5T6X4 162 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 Q6ZR03 302 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 VMO1Q7Z5L0 202 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM183AQ8IXX5 376 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 CD177Q8N6Q3 437 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 KLHDC1Q8N7A1 406 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 GPR82Q96P67 336 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 LOC400499M0QZD8 3231 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 A0A0U1RRA0 63 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 ISLRO14498 428 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 SIAH2O43255 324 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 DDTP30046 118 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 CENPWQ5EE01 88 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 VPS25Q9BRG1 176 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 TRBV20OR9-2A0A075B6H5 130 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 SRRM5B3KS81 715 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 J3QKU1 62 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 SNAI2O43623 268 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 WISP2O76076 250 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 PFN1P07737 140 aaKnown RBP6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 CBLN1P23435 193 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 PKIAP61925 76 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 LDLRAD2Q5SZI1 272 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 ZNF600Q6ZNG1 722 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 DERL1Q9BUN8 251 aa6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 RPUSD1Q9UJJ7 312 aaKnown RBP6.76□□□□□ -1.33
PTPDC1-204ENST00000620992 A0A1B0GV90 55 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 NUDT3O95989 172 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 AMBPP02760 352 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 WNT2P09544 360 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 GCHFRP30047 84 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 NUTF2P61970 127 aaKnown RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 C15orf32Q32M92 178 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 WDR73Q6P4I2 378 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 Q96MF0 132 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 SPRY4Q9C004 299 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 B4DSR2 109 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM178BH3BS89 294 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 MPDU1O75352 247 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 CD99P14209 185 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 COMPP49747 757 aaPredicted RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 Q5PR19 223 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 BEND2Q8NDZ0 799 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 OR52E5Q8NH55 327 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 HSPB9Q9BQS6 159 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 IGHV3-73A0A0B4J1V6 119 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 TRAV5A0A0B4J249 113 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 IGHV3-53P01767 116 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 OR9G9P0C7N8 305 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 SUMO2P61956 95 aaKnown RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 MEF2CQ06413 473 aaPredicted RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 C14orf144Q96I85 54 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 IMMP2LQ96T52 175 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 ASPMQ8IZT6 3477 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 TNRC6BQ9UPQ9 1833 aaKnown RBP6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 IGHV2-26A0A0B4J1V2 119 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 H3BVH4 76 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 SRIP30626 198 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 SAA4P35542 130 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 BRWD1-AS2P59051 145 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 PSMG4Q5JS54 123 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms