RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZNF138P52744 262 aa15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 PET117Q6UWS5 81 aa15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 ZNF835Q9Y2P0 537 aa15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 ASPMQ8IZT6 3477 aa15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 Q71RC1 249 aaPredicted RBP15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 TMEM116Q8NCL8 245 aa15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 HAX1O00165 279 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 DEFB125Q8N687 156 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 C8orf31Q8N9H6 132 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 MCRIP2Q9BUT9 160 aaKnown RBP15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 MAP1LC3CQ9BXW4 147 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 TRAV8-1A0A0A6YYK1 113 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 MUC21A0A0G2JKD1 596 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 MUC21A0A140T8X8 626 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 HSBP1L1C9JCN9 74 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 PLP1P60201 277 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 MUC21Q5SSG8 566 aa15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 CIARTQ8N365 385 aaPredicted RBP15.63■□□□□ 0.09
PDLIM3-212ENST00000620787 IGHV3-21A0A0B4J1V1 117 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 FAM27E3Q08E93 113 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 C16orf54Q6UWD8 224 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 C8orf46Q8TAG6 207 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 H1FXQ92522 213 aaKnown RBP15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 HLA-DRB1P01911 266 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 COL8A1P27658 744 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 SAPCD1Q5SSQ6 148 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 TMUB1Q9BVT8 246 aa15.62■□□□□ 0.09
PDLIM3-212ENST00000620787 OR2T8A6NH00 312 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 IGLV2-11P01706 119 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 TNFRSF1AP19438 455 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 GSX1Q9H4S2 264 aaPredicted RBP15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 OTORQ9NRC9 128 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 APELAP0DMC3 54 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 C12orf54Q6X4T0 127 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 NUP37Q8NFH4 326 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 MS4A6AQ9H2W1 248 aa15.61■□□□□ 0.09
PDLIM3-212ENST00000620787 CFAP47Q6ZTR5 3102 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 DEFB109BQ30KR1 87 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 HSPB8Q9UJY1 196 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 IGHV3-72A0A0B4J1Y9 119 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 HOXB4P17483 251 aaPredicted RBP15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 MC5RP33032 325 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 C1orf185Q5T7R7 199 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 LINC01545Q5VT33 79 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 LYPD2Q6UXB3 125 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 HIGD1AQ9Y241 93 aa15.6■□□□□ 0.09
PDLIM3-212ENST00000620787 SMG1Q96Q15 3661 aaKnown RBP15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 ZNF785A8K8V0 405 aa15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 C17orf100A8MU93 164 aa15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 H0Y8G0 127 aa15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 RPL27AP46776 148 aaKnown RBP15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 LGALS7P47929 136 aa15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 DLX6P56179 175 aa15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 RPS20P60866 119 aaKnown RBP15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 ZADH2Q8N4Q0 377 aa15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 NEU4Q8WWR8 484 aaPredicted RBP15.59■□□□□ 0.09
PDLIM3-212ENST00000620787 ENSAO43768 121 aaKnown RBP15.58■□□□□ 0.09
PDLIM3-212ENST00000620787 CSN3P07498 182 aa15.58■□□□□ 0.09
PDLIM3-212ENST00000620787 GOLT1AQ6ZVE7 132 aa15.58■□□□□ 0.09
PDLIM3-212ENST00000620787 PRNTQ86SH4 94 aa15.58■□□□□ 0.09
PDLIM3-212ENST00000620787 PPIAL4EA0A075B759 164 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 PPIAL4DF5H284 164 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 PPIAL4FP0DN26 164 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 HTR1DP28221 377 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 HIST1H1AQ02539 215 aaPredicted RBP15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 PAX2Q02962 417 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 EXOC3-AS1Q8N2X6 119 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 TEX45Q8NA69 505 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 PMCHL2Q9BQD1 86 aa15.58■□□□□ 0.08
PDLIM3-212ENST00000620787 A0A087X0K7 114 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 CBY3A6NI87 242 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 TMEM178BH3BS89 294 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 TNFRSF13BO14836 293 aaPredicted RBP15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 CNTFRP26992 372 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 TMEM14CQ9P0S9 112 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 NDUFB3O43676 98 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 PSG1P11464 419 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 LYZP61626 148 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 ADIPOQQ15848 244 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 RNF151Q2KHN1 245 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 CTSZQ9UBR2 303 aa15.57■□□□□ 0.08
PDLIM3-212ENST00000620787 A0A1B0GUT8 65 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 TOX4O94842 621 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 CRYGBP07316 175 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 ARMS2P0C7Q2 107 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 LOXP28300 417 aaPredicted RBP15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 SLC25A39Q9BZJ4 359 aaPredicted RBP15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 BOD1L1Q8NFC6 3051 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 TRBV6-1A0A0K0K1D8 114 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 CD5LO43866 347 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 CEACAM4O75871 244 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 FOXE3Q13461 319 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 AMMECR1LQ6DCA0 310 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 GATD1Q8NB37 220 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 ZC2HC1AQ96GY0 325 aa15.56■□□□□ 0.08
PDLIM3-212ENST00000620787 PPBPP02775 128 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 ARF6P62330 175 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 CST9LQ9H4G1 147 aa15.55■□□□□ 0.08
PDLIM3-212ENST00000620787 TIMM8BQ9Y5J9 83 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms