RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 SFRP2Q96HF1 295 aa15.81■□□□□ 0.12
MMP28-207ENST00000619655 LINC00527Q9UJ94 153 aa15.81■□□□□ 0.12
MMP28-207ENST00000619655 MOB4Q9Y3A3 225 aa15.81■□□□□ 0.12
MMP28-207ENST00000619655 F8W735 103 aaPredicted RBP15.8■□□□□ 0.12
MMP28-207ENST00000619655 K7EN84 100 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 RNF125Q96EQ8 232 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 LINC00479Q96M42 142 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 A0A1W2PPQ1 181 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 TOMM40O96008 361 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 NBEAP1P0C6P0 100 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 GP9P14770 177 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 ZNF329Q86UD4 541 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 RPH3ALQ9UNE2 315 aa15.8■□□□□ 0.12
MMP28-207ENST00000619655 H3BUX3 64 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 OR5I1Q13606 314 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 ZNF491Q8N8L2 437 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 FAM110DQ8TAY7 271 aaPredicted RBP15.79■□□□□ 0.12
MMP28-207ENST00000619655 MS4A10Q96PG2 267 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 NAV2Q8IVL1 2488 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 RNF223E7ERA6 249 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 HOXA5P20719 270 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 GNG5P63218 68 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 C15orf32Q32M92 178 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 ZNF600Q6ZNG1 722 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 MEGF9Q9H1U4 602 aa15.79■□□□□ 0.12
MMP28-207ENST00000619655 MRPL27Q9P0M9 148 aaKnown RBP15.79■□□□□ 0.12
MMP28-207ENST00000619655 TRAV30A0A087WSZ9 112 aa15.78■□□□□ 0.12
MMP28-207ENST00000619655 IGHV3-35A0A0C4DH35 117 aa15.78■□□□□ 0.12
MMP28-207ENST00000619655 C9JCJ5 164 aa15.78■□□□□ 0.12
MMP28-207ENST00000619655 PFN1P07737 140 aaKnown RBP15.78■□□□□ 0.12
MMP28-207ENST00000619655 BCL6BQ8N143 479 aaPredicted RBP15.78■□□□□ 0.12
MMP28-207ENST00000619655 LINC01356Q8N9X3 169 aa15.78■□□□□ 0.12
MMP28-207ENST00000619655 FAM3BP58499 235 aaPredicted RBP15.78■□□□□ 0.12
MMP28-207ENST00000619655 NHLRC2Q8NBF2 726 aa15.78■□□□□ 0.12
MMP28-207ENST00000619655 CSPG4Q6UVK1 2322 aa15.78■□□□□ 0.12
MMP28-207ENST00000619655 PGPA6NDG6 321 aa15.77■□□□□ 0.12
MMP28-207ENST00000619655 TGFAP01135 160 aa15.77■□□□□ 0.12
MMP28-207ENST00000619655 TRGC2P03986 189 aa15.77■□□□□ 0.12
MMP28-207ENST00000619655 AMY1AP04745 511 aa15.77■□□□□ 0.12
MMP28-207ENST00000619655 RHOGP84095 191 aa15.77■□□□□ 0.12
MMP28-207ENST00000619655 USF2Q15853 346 aaPredicted RBP15.77■□□□□ 0.12
MMP28-207ENST00000619655 TEX38Q6PEX7 206 aa15.77■□□□□ 0.12
MMP28-207ENST00000619655 APCP25054 2843 aa15.77■□□□□ 0.11
MMP28-207ENST00000619655 TRAV34A0A0B4J273 112 aa15.77■□□□□ 0.11
MMP28-207ENST00000619655 SLC25A5P05141 298 aaKnown RBP15.77■□□□□ 0.11
MMP28-207ENST00000619655 FCGR2BP31994 310 aaPredicted RBP15.77■□□□□ 0.11
MMP28-207ENST00000619655 TRBV24-1A0A075B6N3 115 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 IGHV3OR16-8A0A075B7F1 116 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 A0A096LNT2 108 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 PEX7O00628 323 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 MGST1P10620 155 aaKnown RBP15.76■□□□□ 0.11
MMP28-207ENST00000619655 SGK494Q96LW2 274 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BKO60814 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BJP06899 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 CD99P14209 185 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BOP23527 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 GPR183P32249 361 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BBP33778 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 CDX1P47902 265 aaPredicted RBP15.76■□□□□ 0.11
MMP28-207ENST00000619655 NDUFA6P56556 154 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BDP58876 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 YPEL3P61236 119 aaPredicted RBP15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BCP62807 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST2H2BEQ16778 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.76■□□□□ 0.11
MMP28-207ENST00000619655 OR10G8Q8NGN5 311 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BHQ93079 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BNQ99877 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H2BMQ99879 126 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 CHRDL1Q9BU40 450 aa15.76■□□□□ 0.11
MMP28-207ENST00000619655 HIST1H1BP16401 226 aaKnown RBP15.75■□□□□ 0.11
MMP28-207ENST00000619655 CNN1P51911 297 aaKnown RBP15.75■□□□□ 0.11
MMP28-207ENST00000619655 ERVFC1-1P60608 527 aa15.75■□□□□ 0.11
MMP28-207ENST00000619655 KCNIP4Q6PIL6 250 aa15.75■□□□□ 0.11
MMP28-207ENST00000619655 ZNF48Q96MX3 618 aaPredicted RBP15.75■□□□□ 0.11
MMP28-207ENST00000619655 SHANK2-AS3Q9BTD1 123 aa15.75■□□□□ 0.11
MMP28-207ENST00000619655 DOPEY2Q9Y3R5 2298 aa15.75■□□□□ 0.11
MMP28-207ENST00000619655 WI2-2373I1.2A0A1W2PRP0 233 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 SLC17A3O00476 420 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 PPP1R2P9O14990 202 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 CTSGP08311 255 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 GATA3P23771 443 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 DEFB113Q30KQ7 82 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 Q9H3A6 140 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 ZNF586Q9NXT0 402 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 KMT2BQ9UMN6 2715 aaPredicted RBP15.74■□□□□ 0.11
MMP28-207ENST00000619655 H3BRN7 92 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 Q5PR19 223 aa15.74■□□□□ 0.11
MMP28-207ENST00000619655 IFITM10A6NMD0 228 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 S100A2P29034 98 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 SRP14P37108 136 aaKnown RBP15.73■□□□□ 0.11
MMP28-207ENST00000619655 MYCNOSP40205 109 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 HIST2H2BCQ6DN03 193 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 IGF2BP2-AS1Q96M15 143 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 GNB4Q9HAV0 340 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 TRAV41A0A0B4J266 112 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 BPIFA4PQ86YQ2 179 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 RNASE7Q9H1E1 156 aaKnown RBP15.73■□□□□ 0.11
MMP28-207ENST00000619655 EPDR1Q9UM22 224 aa15.73■□□□□ 0.11
MMP28-207ENST00000619655 LY96Q9Y6Y9 160 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms