RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	C19orf24	Q9BVV8	132 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	MRPL32	Q9BYC8	188 aa	Known RBP	11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	MED13L	Q71F56	2210 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	OR2J3	O76001	311 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	DYNLRB1	Q9NP97	96 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	FNDC10	F2Z333	226 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	BSPH1	Q075Z2	132 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	ZNF329	Q86UD4	541 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	GRAMD2B	Q96HH9	432 aa		11.65	□□□□□ -0.54
SMTN-223	ENST00000619644	KLK10	O43240	276 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	CACNG8	Q8WXS5	425 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	TCRBV4S1A1T	A0A5B7	111 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	C17orf100	A8MU93	164 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	SYS1-DBNDD2	H3BUS1	97 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	PSG9	Q00887	426 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	RUSC1-AS1	Q66K80	236 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	ZNF833P	Q6ZTB9	187 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	CRX	O43186	299 aa	Predicted RBP	11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	VMA21	Q3ZAQ7	101 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	C12orf54	Q6X4T0	127 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	VSTM2A	Q8TAG5	236 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644	ASCL2	Q99929	193 aa		11.64	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A1W2PPI3	338 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	PRSS47	A8MTI9	375 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	FAM231D	Q6ZW35	169 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	DAZAP1	Q96EP5	407 aa	Known RBP	11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	PGLYRP4	Q96LB8	373 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	GAGE12B	A1L429	117 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	VWC2L	B2RUY7	222 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644		K7ERU9	68 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	FAM87A	P0C7U9	286 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	CNTFR	P26992	372 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	ADIPOQ	Q15848	244 aa		11.63	□□□□□ -0.55
SMTN-223	ENST00000619644	IGHV1-24	A0A0C4DH33	117 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	C16orf97	H3BN30	126 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	HIST1H1E	P10412	219 aa	Known RBP	11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	ZNF841	Q6ZN19	808 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	LRBA	P50851	2863 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	LYZ	P61626	148 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	PLGLA	Q15195	96 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	OR5AN1	Q8NGI8	311 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	ZZEF1	O43149	2961 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	CEP295	Q9C0D2	2601 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A087X0K7	114 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	TRAV8-1	A0A0A6YYK1	113 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	TRAV8-6	A0A0B4J262	113 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	LEPROTL1	O95214	131 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	NBEAP1	P0C6P0	100 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	COX7A1	P24310	79 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	FXYD5	Q96DB9	178 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	ZC2HC1A	Q96GY0	325 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	TPPP3	Q9BW30	176 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	C1RL	Q9NZP8	487 aa		11.62	□□□□□ -0.55
SMTN-223	ENST00000619644	CSMD1	Q96PZ7	3565 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	WNK2	Q9Y3S1	2297 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	HSBP1L1	C9JCN9	74 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	MCRIP2	Q9BUT9	160 aa	Known RBP	11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	NCOR1P1	Q9H4R4	102 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A1B0GXF2	115 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	CGB1	A6NKQ9	187 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	LYNX1	G3V0Z9	82 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	LYNX1	P0DP58	116 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	TMEM177	Q53S58	311 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	SSX8	Q7RTT4	187 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	TMEM167A	Q8TBQ9	72 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	PERP	Q96FX8	193 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	SCRT2	Q9NQ03	307 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	EPDR1	Q9UM22	224 aa		11.61	□□□□□ -0.55
SMTN-223	ENST00000619644	FCN3	O75636	299 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	CSN3	P07498	182 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	TMEM191A	Q9H0A3	160 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	MEGF9	Q9H1U4	602 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	CACNA1B	Q00975	2339 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	IGKV1D-37	A0A075B6S9	117 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	PSMB11	A5LHX3	300 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	PRRG2	O14669	202 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	CD5L	O43866	347 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644		P01737	135 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	RBP4	P02753	201 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	TEX36	Q5VZQ5	186 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	FAM71F2	Q6NXP2	309 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	CUL9	Q8IWT3	2517 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	C22orf46	C9J442	243 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	ATP5I	P56385	69 aa	Predicted RBP	11.6	□□□□□ -0.55
SMTN-223	ENST00000619644	ATP5L2	Q7Z4Y8	100 aa		11.6	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A0G2JNJ9	132 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	SAP30	O75446	220 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	MEF2C	Q06413	473 aa	Predicted RBP	11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	FAM162B	Q5T6X4	162 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	PIP4P1	Q86T03	277 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	TMEM186	Q96B77	213 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	CTSZ	Q9UBR2	303 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644		Q9UFV3	132 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	TLN1	Q9Y490	2541 aa	Known RBP	11.59	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A1W2PRD5	423 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A1W2PRF3	423 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644		A0A1W2PRM7	423 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	TMEM238	C9JI98	176 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	TMEM178B	H3BS89	294 aa		11.59	□□□□□ -0.55
SMTN-223	ENST00000619644	RPL27A	P46776	148 aa	Known RBP	11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms