RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 TMEM252Q8N6L7 170 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 OR4D5Q8NGN0 318 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 SUN5Q8TC36 379 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 TMEM190Q8WZ59 177 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 C17orf77Q96MU5 243 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 XCL2Q9UBD3 114 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 COX7A2P2O60397 106 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 MPC2O95563 127 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 ID3Q02535 119 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 CLLU1Q5K131 121 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF600Q6ZNG1 722 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 HSD17B13Q7Z5P4 300 aaPredicted RBP3.47□□□□□ -1.85
SYCP1-210ENST00000618516 EIF4E3Q8N5X7 224 aaKnown RBP3.47□□□□□ -1.85
SYCP1-210ENST00000618516 CIB3Q96Q77 187 aaPredicted RBP3.47□□□□□ -1.85
SYCP1-210ENST00000618516 SLC25A39Q9BZJ4 359 aaPredicted RBP3.47□□□□□ -1.85
SYCP1-210ENST00000618516 UFC1Q9Y3C8 167 aa3.47□□□□□ -1.85
SYCP1-210ENST00000618516 HUWE1Q7Z6Z7 4374 aaKnown RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF705FA8MVS1 300 aaPredicted RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 TEX46H3BTG2 121 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 CHEK1O14757 476 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 OR7C2O60412 319 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 PITX3O75364 302 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 PYYP10082 97 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 SPP1P10451 314 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 LORP23490 312 aaPredicted RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 RPL12P30050 165 aaKnown RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 RPP30P78346 268 aaKnown RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 EWSR1Q01844 656 aaKnown RBP eCLIP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 C2orf83Q53S99 150 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 SPATA31B1PQ5VZV4 182 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 LCN12Q6JVE5 192 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 FAM122CQ6P4D5 195 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 IL34Q6ZMJ4 242 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 ZNF709Q8N972 641 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 WFDC9Q8NEX5 89 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 MYOZ3Q8TDC0 251 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 PCNPQ8WW12 178 aaKnown RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 IL22RA2Q969J5 263 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 MCRIP2Q9BUT9 160 aaKnown RBP3.46□□□□□ -1.85
SYCP1-210ENST00000618516 TMEM147Q9BVK8 224 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 UQCC1Q9NVA1 299 aa3.46□□□□□ -1.85
SYCP1-210ENST00000618516 TRAV12-2A0A075B6T6 113 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 PMS2P5A8MQ11 134 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 CORTO00230 105 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 B2MP61769 119 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 RHOBP62745 196 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 CTAG1AP78358 180 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 FAM78BQ5VT40 261 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 LAMTOR1Q6IAA8 161 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 TEPPQ6URK8 271 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 LINC00305Q7Z4B0 112 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 ZNF546Q86UE3 836 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 STPG3Q8N7X2 389 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 RNF152Q8N8N0 203 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 C16orf92Q96LL3 132 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 ARPC5LQ9BPX5 153 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 ARV1Q9H2C2 271 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 MS4A6AQ9H2W1 248 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 SMPXQ9UHP9 88 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 IGHV7-4-1A0A0J9YVY3 117 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 H3BUA1 57 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 M0R3E3 92 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 NDUFA4O00483 81 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 PRAF2O60831 178 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 SCGB2A1O75556 95 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 IGLV1-51P01701 117 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 SLC25A6P12236 298 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 HTN3P15516 51 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 PAFAH1B2P68402 229 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 FAM209BQ5JX69 171 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 GDF5OSQ5U4N7 250 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 Q6ZRG5 221 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 VN1R17PQ8TDU5 208 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 RAB40CQ96S21 281 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 TMEM208Q9BTX3 173 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 SH3BGRL3Q9H299 93 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 PPP1R14DQ9NXH3 145 aa3.46□□□□□ -1.86
SYCP1-210ENST00000618516 DNAH7Q8WXX0 4024 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 IGKV1D-37A0A075B6S9 117 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 M0R2Z0 102 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 DEDDO75618 318 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 NUP62P37198 522 aaPredicted RBP3.45□□□□□ -1.86
SYCP1-210ENST00000618516 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
SYCP1-210ENST00000618516 FGF8P55075 233 aaPredicted RBP3.45□□□□□ -1.86
SYCP1-210ENST00000618516 HBG1P69891 147 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 HBG2P69892 147 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 S100A12P80511 92 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 SPSB3Q6PJ21 355 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 GPHB5Q86YW7 130 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 LRTM2Q8N967 370 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 INO80EQ8NBZ0 244 aaPredicted RBP3.45□□□□□ -1.86
SYCP1-210ENST00000618516 OR1S2Q8NGQ3 325 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 SCGB1C1Q8TD33 95 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 RNASEH2CQ8TDP1 164 aaKnown RBP3.45□□□□□ -1.86
SYCP1-210ENST00000618516 MGST2Q99735 147 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 ZNF436Q9C0F3 470 aaPredicted RBP3.45□□□□□ -1.86
SYCP1-210ENST00000618516 FBXL17Q9UF56 701 aa3.45□□□□□ -1.86
SYCP1-210ENST00000618516 HYPMO75409 117 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms