RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 CSTL1Q9H114 145 aa10.03□□□□□ -0.8
UPK1A-203ENST00000616789 SEPSECSQ9HD40 501 aaKnown RBP10.03□□□□□ -0.8
UPK1A-203ENST00000616789 NRN1Q9NPD7 142 aa10.03□□□□□ -0.8
UPK1A-203ENST00000616789 SPRY2O43597 315 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 DEDDO75618 318 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 CFDP00746 253 aaPredicted RBP10.02□□□□□ -0.8
UPK1A-203ENST00000616789 FABP1P07148 127 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 PLP1P60201 277 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 EWSR1Q01844 656 aaKnown RBP eCLIP10.02□□□□□ -0.8
UPK1A-203ENST00000616789 DEFB135Q30KP9 77 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 GSG1LQ6UXU4 331 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 NPVFQ9HCQ7 196 aa10.02□□□□□ -0.8
UPK1A-203ENST00000616789 C5orf51A6NDU8 294 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 RRAS2P62070 204 aaPredicted RBP10.01□□□□□ -0.81
UPK1A-203ENST00000616789 RAB32Q13637 225 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 PATE2Q6UY27 113 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 GGACTQ9BVM4 153 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 SLC45A2Q9UMX9 530 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 FAM24AA6NFZ4 105 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 ZNF98A6NK75 572 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 KNCNA6PVL3 124 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 INMT-MINDY4F8WBC2 141 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 LYL1P12980 280 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 AKR1C1Q04828 323 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 OR10P1Q8NGE3 313 aa10.01□□□□□ -0.81
UPK1A-203ENST00000616789 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
UPK1A-203ENST00000616789 SMCO3A2RU48 225 aa10□□□□□ -0.81
UPK1A-203ENST00000616789 SIX6O95475 246 aa10□□□□□ -0.81
UPK1A-203ENST00000616789 NUP62P37198 522 aaPredicted RBP10□□□□□ -0.81
UPK1A-203ENST00000616789 H2BFSP57053 126 aa10□□□□□ -0.81
UPK1A-203ENST00000616789 VWC2Q2TAL6 325 aa10□□□□□ -0.81
UPK1A-203ENST00000616789 CSNK1G2-AS1Q8NCQ2 148 aa10□□□□□ -0.81
UPK1A-203ENST00000616789 BPIFCQ8NFQ6 507 aa10□□□□□ -0.81
UPK1A-203ENST00000616789 LYRM2Q9NU23 88 aaPredicted RBP10□□□□□ -0.81
UPK1A-203ENST00000616789 IGSF23A1L1A6 192 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 H0YIZ8 118 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 H3BRN7 92 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 L7N2F9 121 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 PRAF2O60831 178 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 LINC00869P0C866 280 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 ORM2P19652 201 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 DEFB1P60022 68 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 VAMP2P63027 116 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 PSMG4Q5JS54 123 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 TEPPQ6URK8 271 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 MGST2Q99735 147 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 SLC25A32Q9H2D1 315 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 GPN1Q9HCN4 374 aaPredicted RBP9.99□□□□□ -0.81
UPK1A-203ENST00000616789 PFDN2Q9UHV9 154 aa9.99□□□□□ -0.81
UPK1A-203ENST00000616789 A0A0J9YWU9 116 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 H3BMM0 161 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 MRPS12O15235 138 aaKnown RBP9.98□□□□□ -0.81
UPK1A-203ENST00000616789 CST7O76096 145 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 C4BPBP20851 252 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 DEFA1P59665 94 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 DEFA3P59666 94 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 SELENOTP62341 195 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 SLC38A11Q08AI6 406 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 ACTL10Q5JWF8 245 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 ZFAND6Q6FIF0 208 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 TMEM252Q8N6L7 170 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 OR1B1Q8NGR6 318 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 PPP1R14BQ96C90 147 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 SLC25A39Q9BZJ4 359 aaPredicted RBP9.98□□□□□ -0.81
UPK1A-203ENST00000616789 NMES1Q9C002 83 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 FBXL17Q9UF56 701 aa9.98□□□□□ -0.81
UPK1A-203ENST00000616789 AGPAT2O15120 278 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 BCAP31P51572 246 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 STHQ8IWL8 128 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 OR8I2Q8N0Y5 310 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 GATAD1Q8WUU5 269 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 C20orf173Q96LM9 149 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 UHRF2Q96PU4 802 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 WDR83OSQ9Y284 106 aa9.97□□□□□ -0.81
UPK1A-203ENST00000616789 ALMS1Q8TCU4 4167 aa9.96□□□□□ -0.81
UPK1A-203ENST00000616789 TRAV8-2A0A0B4J237 113 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 GOSR2O14653 212 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 CA1P00915 261 aaPredicted RBP9.96□□□□□ -0.82
UPK1A-203ENST00000616789 ATF4P18848 351 aaPredicted RBP9.96□□□□□ -0.82
UPK1A-203ENST00000616789 SULT1A1P50225 295 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 CAV2P51636 162 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 S100A10P60903 97 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 SNRPD3P62318 126 aaKnown RBP9.96□□□□□ -0.82
UPK1A-203ENST00000616789 PRR20EP86478 221 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 PRR20CP86479 221 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 PRR20DP86480 221 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 PRR20BP86481 221 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 PRR20AP86496 221 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 TMEM217Q8N7C4 229 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 IL17DQ8TAD2 202 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 TMEM37Q8WXS4 190 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 RNF126Q9BV68 326 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 OR5AC2Q9NZP5 309 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 DOK5Q9P104 306 aa9.96□□□□□ -0.82
UPK1A-203ENST00000616789 MGAT4CQ9UBM8 478 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms