RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 C4orf26Q17RF5 130 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 MRPL2Q5T653 305 aaKnown RBP12.46□□□□□ -0.41
NOP56-220ENST00000616692 OTOSQ8NHW6 89 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 PIGLQ9Y2B2 252 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.41
NOP56-220ENST00000616692 EXPH5Q8NEV8 1989 aa12.46□□□□□ -0.42
NOP56-220ENST00000616692 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 SPTBP11277 2137 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 BCL3P20749 454 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 HCFC1P51610 2035 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 NCOA6Q14686 2063 aaPredicted RBP12.45□□□□□ -0.42
NOP56-220ENST00000616692 CPAMD8Q8IZJ3 1885 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 CCL21O00585 134 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 C1orf105O95561 183 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 ASIPP42127 132 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 RPS27P42677 84 aaKnown RBP12.45□□□□□ -0.42
NOP56-220ENST00000616692 NCBP2P52298 156 aaKnown RBP eCLIP12.45□□□□□ -0.42
NOP56-220ENST00000616692 FAM53BQ14153 422 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 IMMP1LQ96LU5 166 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
NOP56-220ENST00000616692 FZR1Q9UM11 496 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 A0A0J9YW62 118 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 RPL35AP18077 110 aaKnown RBP12.45□□□□□ -0.42
NOP56-220ENST00000616692 PIGCQ92535 297 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 PRNDQ9UKY0 176 aa12.45□□□□□ -0.42
NOP56-220ENST00000616692 TRGV8A0A0C4DH27 118 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 TEX50A0A1B0GTY4 177 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 TNFSF11O14788 317 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 DSCR4P56555 118 aaPredicted RBP12.44□□□□□ -0.42
NOP56-220ENST00000616692 PCOLCEQ15113 449 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 BCL6BQ8N143 479 aaPredicted RBP12.44□□□□□ -0.42
NOP56-220ENST00000616692 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
NOP56-220ENST00000616692 NHP2Q9NX24 153 aaKnown RBP12.44□□□□□ -0.42
NOP56-220ENST00000616692 COL12A1Q99715 3063 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 OOSP1A8MZH6 123 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 BGLAPP02818 100 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 MS4A18Q3C1V0 323 aa12.44□□□□□ -0.42
NOP56-220ENST00000616692 H0YIG0 161 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 H3BP45 60 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 DNPH1O43598 174 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 CLDN14O95500 239 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 SSR2P43308 183 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 C9orf153Q5TBE3 101 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 TAF15Q92804 592 aaKnown RBP eCLIP12.43□□□□□ -0.42
NOP56-220ENST00000616692 ZNF331Q9NQX6 463 aaPredicted RBP12.43□□□□□ -0.42
NOP56-220ENST00000616692 LY96Q9Y6Y9 160 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 SEC16AO15027 2179 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 IGKV1D-8A0A087WSZ0 117 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 CHEK1O14757 476 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 MPV17P39210 176 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 CBLN3Q6UW01 205 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 PROCRQ9UNN8 238 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 RELNP78509 3460 aa12.43□□□□□ -0.42
NOP56-220ENST00000616692 DOCK10Q96BY6 2186 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 LOC107986453A0A1B0GWG9 222 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 ATP5LO75964 103 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 Q6ZQT7 251 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 TRPT1Q86TN4 253 aaKnown RBP12.42□□□□□ -0.42
NOP56-220ENST00000616692 ZNF488Q96MN9 340 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 B9D1Q9UPM9 204 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 H0YGG7 62 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 LMX1BO60663 402 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
NOP56-220ENST00000616692 MZT1Q08AG7 82 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
NOP56-220ENST00000616692 LIME1Q9H400 295 aa12.42□□□□□ -0.42
NOP56-220ENST00000616692 RP1L1Q8IWN7 2480 aaPredicted RBP12.41□□□□□ -0.42
NOP56-220ENST00000616692 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 MDS2Q8NDY4 140 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 HBG1P69891 147 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 HBG2P69892 147 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 ADORA2A-AS1P86434 159 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 SLC38A11Q08AI6 406 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 GATD1Q8NB37 220 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 TXNDC17Q9BRA2 123 aa12.41□□□□□ -0.42
NOP56-220ENST00000616692 PRDX1Q06830 199 aaKnown RBP12.4□□□□□ -0.42
NOP56-220ENST00000616692 HOXB13Q92826 284 aaPredicted RBP12.4□□□□□ -0.42
NOP56-220ENST00000616692 ASAH2BP0C7U1 165 aa12.4□□□□□ -0.42
NOP56-220ENST00000616692 ZNF718Q3SXZ3 478 aa12.4□□□□□ -0.42
NOP56-220ENST00000616692 C8orf44Q96CB5 159 aa12.4□□□□□ -0.42
NOP56-220ENST00000616692 PBOV1Q9GZY1 135 aa12.4□□□□□ -0.42
NOP56-220ENST00000616692 FXYD4P59646 89 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 RRN3P1Q2M238 152 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 VKORC1Q9BQB6 163 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 TMEM222Q9H0R3 208 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 SCO2A0A1W2PP80 73 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 C9JCJ5 164 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 NBR2O15453 112 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 FOXS1O43638 330 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 PKIGQ9Y2B9 76 aa12.39□□□□□ -0.43
NOP56-220ENST00000616692 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
NOP56-220ENST00000616692 C3orf85A0A1B0GTC6 90 aa12.38□□□□□ -0.43
NOP56-220ENST00000616692 UBE2L5PA0A1B0GUS4 154 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms