RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 NEGR1Q7Z3B1 354 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 DTX1Q86Y01 620 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 BADQ92934 168 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 FMC1Q96HJ9 113 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 PSG8Q9UQ74 426 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 GVINP1Q7Z2Y8 2422 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 SPRY3O43610 288 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 PRDX2P32119 198 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 AMN1Q8IY45 258 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 LMO7DNF2Z398 122 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 KLRB1Q12918 225 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 J3KRW8 73 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 SIVA1O15304 175 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 MDP1Q86V88 176 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 OSR1Q8TAX0 266 aaPredicted RBP11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 COLQQ9Y215 455 aaPredicted RBP11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 TNFRSF1AP19438 455 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 RASL11BQ9BPW5 248 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 DEFB127Q9H1M4 99 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 IGLL5B9A064 214 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 IGFBP4P22692 258 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 DUTP33316 252 aaKnown RBP11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 WDR31Q8NA23 367 aa11.09□□□□□ -0.63
PPP4R3B-205ENST00000616288 MPV17P39210 176 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 SSBP2P81877 361 aaPredicted RBP11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 DUSP23Q9BVJ7 150 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 TRAV40A0A0B4J280 105 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 C9JAW5 83 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 ATP5LO75964 103 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 PSMG4Q5JS54 123 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 CEND1Q8N111 149 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 PSPNO60542 156 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 Q6ZR03 302 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 PTH2Q96A98 100 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
PPP4R3B-205ENST00000616288 OBSL1O75147 1896 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 CACNA1GO43497 2377 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 TNCP24821 2201 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 C15orf61A6NNL5 157 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 CD27P26842 260 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 FBXL15Q9H469 300 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 K7ESF4 209 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 FOXI1Q12951 378 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 C3orf36Q3SXR2 165 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 PPP1R27Q86WC6 154 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF785A8K8V0 405 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 LGALS9BQ3B8N2 356 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 LGALS9CQ6DKI2 356 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF714Q96N38 554 aa11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 KLF13Q9Y2Y9 288 aaPredicted RBP11.07□□□□□ -0.64
PPP4R3B-205ENST00000616288 MAGEA5P43359 124 aa11.06□□□□□ -0.64
PPP4R3B-205ENST00000616288 INSL3P51460 131 aa11.06□□□□□ -0.64
PPP4R3B-205ENST00000616288 LOXL2Q9Y4K0 774 aa11.06□□□□□ -0.64
PPP4R3B-205ENST00000616288 MGPP08493 103 aa11.06□□□□□ -0.64
PPP4R3B-205ENST00000616288 Q6ZPA2 131 aa11.06□□□□□ -0.64
PPP4R3B-205ENST00000616288 IGHV3-72A0A0B4J1Y9 119 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 C2CD4DB7Z1M9 353 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 COX6CP09669 75 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 Q6ZS52 159 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF329Q86UD4 541 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 EXOC3-AS1Q8N2X6 119 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNRF1Q8ND25 227 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 CRIP3Q6Q6R5 217 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 TMEM8BA6NDV4 472 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 LTAP01374 205 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 GDF5OSQ5U4N7 250 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 RAX2Q96IS3 184 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 CALYQ9NYX4 217 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 CD69Q07108 199 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 TMEM170BQ5T4T1 132 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 Q6ZUT4 128 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 SCNM1Q9BWG6 230 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 SIGLEC8Q9NYZ4 499 aa11.05□□□□□ -0.64
PPP4R3B-205ENST00000616288 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 F5H697 171 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 KLRD1Q13241 179 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 SRSF6Q13247 344 aaKnown RBP11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 MRPL23Q16540 153 aaKnown RBP11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 UFSP1Q6NVU6 142 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 LYZL1Q6UWQ5 148 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 ZNF562Q6V9R5 426 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 COL8A2P25067 703 aa11.04□□□□□ -0.64
PPP4R3B-205ENST00000616288 NFAM1Q8NET5 270 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms