RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 JMJD8Q96S16 334 aa10.66□□□□□ -0.7
MSH6-214ENST00000616033 G3V4G9 280 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
MSH6-214ENST00000616033 FAM87AP0C7U9 286 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 IGLC1P0CG04 106 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 NMUP48645 174 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 DLX1P56177 255 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 MBD6Q96DN6 1003 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 FAM167A-AS1Q96KT0 104 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 ATP6V0BQ99437 205 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 SPTA1P02549 2419 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 CUL9Q8IWT3 2517 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 DSCAML1Q8TD84 2053 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 ACP1P24666 158 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 RTL8BQ17RB0 113 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 FAM71F2Q6NXP2 309 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 GTSF1Q8WW33 167 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
MSH6-214ENST00000616033 C21orf140B9A014 251 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 NTN3O00634 580 aaPredicted RBP10.65□□□□□ -0.71
MSH6-214ENST00000616033 NCR2O95944 276 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 SP9P0CG40 484 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 RHOGP84095 191 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 CD69Q07108 199 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 DIAPH2-AS1Q14236 149 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 SFTA2Q6UW10 78 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 H1FXQ92522 213 aaKnown RBP10.65□□□□□ -0.71
MSH6-214ENST00000616033 PTPRBP23467 1997 aa10.65□□□□□ -0.71
MSH6-214ENST00000616033 PPIAL4EA0A075B759 164 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 TRGV8A0A0C4DH27 118 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 PPIAL4FP0DN26 164 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 RNASE2P10153 161 aaKnown RBP10.64□□□□□ -0.71
MSH6-214ENST00000616033 GATA3P23771 443 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 PATE2Q6UY27 113 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 DEFB125Q8N687 156 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 FOXA2Q9Y261 457 aaPredicted RBP10.64□□□□□ -0.71
MSH6-214ENST00000616033 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 TNRC6BQ9UPQ9 1833 aaKnown RBP10.64□□□□□ -0.71
MSH6-214ENST00000616033 FAM106CPP0CH98 169 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 MSMPQ1L6U9 139 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 FAM106AQ4KMX7 169 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 RUSC1-AS1Q66K80 236 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 LCNL1Q6ZST4 164 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 OR10AG1Q8NH19 301 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 C9orf172C9J069 976 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 UPK2O00526 184 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 HLA-DRB1P01911 266 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 CCL3L1P16619 93 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 PPIFP30405 207 aaKnown RBP10.64□□□□□ -0.71
MSH6-214ENST00000616033 CCL11P51671 97 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 PRCDQ00LT1 54 aa10.64□□□□□ -0.71
MSH6-214ENST00000616033 MRPL20Q9BYC9 149 aaKnown RBP10.64□□□□□ -0.71
MSH6-214ENST00000616033 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
MSH6-214ENST00000616033 A8MWL6 223 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 ACACAQ13085 2346 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 SH2D6Q7Z4S9 175 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 SRSF12Q8WXF0 261 aaKnown RBP10.63□□□□□ -0.71
MSH6-214ENST00000616033 EPDR1Q9UM22 224 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 CT45A6P0DMU7 189 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 CT45A5P0DMU8 189 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 CT45A7P0DMV0 189 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 GUSBP1Q15486 140 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 FAM90A1Q86YD7 464 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 S4R3C0 116 aa10.63□□□□□ -0.71
MSH6-214ENST00000616033 SLC25A17O43808 307 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 C17orf58Q2M2W7 97 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 PCSK5Q92824 1860 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 LYZP61626 148 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 CCL8P80075 99 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 FAM120AOSQ5T036 256 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 SHISA2Q6UWI4 295 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 TMEM164Q5U3C3 297 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 DDB2Q92466 427 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 OTOGLQ3ZCN5 2332 aa10.62□□□□□ -0.71
MSH6-214ENST00000616033 INO80CQ6PI98 192 aaPredicted RBP10.61□□□□□ -0.71
MSH6-214ENST00000616033 OR1L4Q8NGR5 311 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 GEMIN7Q9H840 131 aaKnown RBP10.61□□□□□ -0.71
MSH6-214ENST00000616033 TPSG1Q9NRR2 321 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 A0A0G2JLM5 398 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 KIR2DS2P43631 304 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 TMEM97Q5BJF2 176 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 PRR7Q8TB68 274 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 GPR82Q96P67 336 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 KBTBD11-OT1A0A1B0GTJ5 212 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 LIPFP07098 398 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 ARMS2P0C7Q2 107 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 WT1-ASQ06250 92 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
MSH6-214ENST00000616033 HSD52Q0P140 79 aa10.61□□□□□ -0.71
MSH6-214ENST00000616033 FXYD5Q96DB9 178 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms