RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 RBMY1DP0C7P1 496 aaKnown RBP15.48■□□□□ 0.07
SPAST-203ENST00000615843 RBMY1A1P0DJD3 496 aaKnown RBP15.48■□□□□ 0.07
SPAST-203ENST00000615843 RBMY1CP0DJD4 496 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 SRSF6Q13247 344 aaKnown RBP15.48■□□□□ 0.07
SPAST-203ENST00000615843 Q6P435 159 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 MED12Q93074 2177 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 IGKV3D-20A0A0C4DH25 116 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 DUX3Q96PT4 197 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 TRGV9Q99603 122 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 PINLYPA6NC86 204 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 LINC01549A6NIU2 74 aa15.48■□□□□ 0.07
SPAST-203ENST00000615843 MYOD1P15172 320 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 LINC01560Q8TB33 94 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 ANK1P16157 1881 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 RSPO3Q9BXY4 272 aaPredicted RBP15.47■□□□□ 0.07
SPAST-203ENST00000615843 YPEL3P61236 119 aaPredicted RBP15.47■□□□□ 0.07
SPAST-203ENST00000615843 ZNF726P1Q15940 193 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 CRIPAKQ8N1N5 446 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 PGPEP1Q9NXJ5 209 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 SLC25A15Q9Y619 301 aa15.47■□□□□ 0.07
SPAST-203ENST00000615843 IGHV3-64A0A075B6Q5 118 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 SSBP2P81877 361 aaPredicted RBP15.46■□□□□ 0.07
SPAST-203ENST00000615843 C20orf204Q6ZNR8 217 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 ZNF329Q86UD4 541 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 LINC00479Q96M42 142 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.46■□□□□ 0.07
SPAST-203ENST00000615843 TMEM238C9JI98 176 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 M0R2P5 195 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 SELLP14151 372 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 LINC00205P59089 165 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 STPG4Q8N801 248 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 PAX9P55771 341 aa15.46■□□□□ 0.07
SPAST-203ENST00000615843 LRRK1Q38SD2 2015 aa15.46■□□□□ 0.06
SPAST-203ENST00000615843 TOMM40O96008 361 aa15.46■□□□□ 0.06
SPAST-203ENST00000615843 IGHV1-18A0A0C4DH31 117 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 PIMREGQ9BSJ6 248 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 METRNQ9UJH8 293 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 CD177Q8N6Q3 437 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 LIME1Q9H400 295 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 CD28P10747 220 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 CD24P25063 80 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 TMEM158Q8WZ71 300 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 SPAG8Q99932 426 aaPredicted RBP15.45■□□□□ 0.06
SPAST-203ENST00000615843 SH2D1AO60880 128 aa15.45■□□□□ 0.06
SPAST-203ENST00000615843 CFHR1Q03591 330 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 C1orf147Q96MC9 270 aaPredicted RBP15.44■□□□□ 0.06
SPAST-203ENST00000615843 PDLIM4P50479 330 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 CDPF1Q6NVV7 123 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 AMN1Q8IY45 258 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 TMEM167AQ8TBQ9 72 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 IGKV1-6A0A0C4DH72 117 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 RHOGP84095 191 aa15.44■□□□□ 0.06
SPAST-203ENST00000615843 E9PLN8 166 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 GFRA4Q9GZZ7 299 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 IGHV3-11P01762 117 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 A0A1B0GWJ7 208 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 FNDC10F2Z333 226 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 CYYR1Q96J86 154 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 MBNL3Q9NUK0 354 aaKnown RBP15.43■□□□□ 0.06
SPAST-203ENST00000615843 PLAURQ03405 335 aa15.43■□□□□ 0.06
SPAST-203ENST00000615843 TIMM23O14925 209 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 ZCCHC24Q8N2G6 241 aaKnown RBP15.42■□□□□ 0.06
SPAST-203ENST00000615843 AKAP6Q13023 2319 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 C9orf118A6NHY6 69 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 SMKR1H3BMG3 65 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 MLNRO43193 412 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 VOPP1Q96AW1 172 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 IGLL1P15814 213 aa15.42■□□□□ 0.06
SPAST-203ENST00000615843 FOXL2NBQ6ZUU3 175 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 Q86TA4 180 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 TNFRSF14Q92956 283 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 IGHV1-46P01743 117 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 CSRP2Q16527 193 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 C2orf82Q6UX34 121 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 TEX43Q6ZNM6 134 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 NPFFR1Q9GZQ6 430 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 CEP250Q9BV73 2442 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 MMP23AO75900 390 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 DOCK6Q96HP0 2047 aa15.41■□□□□ 0.06
SPAST-203ENST00000615843 RNASE2P10153 161 aaKnown RBP15.4■□□□□ 0.06
SPAST-203ENST00000615843 RPL15P61313 204 aaKnown RBP15.4■□□□□ 0.06
SPAST-203ENST00000615843 CENPVQ7Z7K6 275 aaPredicted RBP15.4■□□□□ 0.06
SPAST-203ENST00000615843 A0A0U1RRA0 63 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 SPRR3Q9UBC9 169 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 K7EP13 123 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 MLANAQ16655 118 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 ARMS2P0C7Q2 107 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 TMEM249Q2WGJ8 235 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 Q8TAT8 98 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 LINC01587Q99440 93 aa15.4■□□□□ 0.06
SPAST-203ENST00000615843 ARTNQ5T4W7 220 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 HS3ST6Q96QI5 342 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 TSSC4Q9Y5U2 329 aaPredicted RBP15.39■□□□□ 0.05
SPAST-203ENST00000615843 OVOL1O14753 267 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 UCNP55089 124 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 V9GYV3 84 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 PLEKHB2Q96CS7 222 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 SIP14410 1827 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 IGHV2-26A0A0B4J1V2 119 aa15.39■□□□□ 0.05
SPAST-203ENST00000615843 LYPD1Q8N2G4 141 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms