RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 RD3LP0DJH9 198 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 PSG1P11464 419 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 EVI2AP22794 236 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 SUB1P53999 127 aaKnown RBP eCLIP4.51□□□□□ -1.69
MUC1-227ENST00000615517 FABP5Q01469 135 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 IGFL4Q6B9Z1 124 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 CMTM1Q8IZ96 169 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 SLC35G3Q8N808 338 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 ZNF555Q8NEP9 628 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 IL22RA2Q969J5 263 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 MRGPRFQ96AM1 343 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 C16orf92Q96LL3 132 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 C9orf16Q9BUW7 83 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 DNAJC4Q9NNZ3 241 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 ICOSQ9Y6W8 199 aa4.51□□□□□ -1.69
MUC1-227ENST00000615517 TRAV8-2A0A0B4J237 113 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 SCO2A0A1W2PP80 73 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 ZNF324O75467 553 aaPredicted RBP4.5□□□□□ -1.69
MUC1-227ENST00000615517 DUSP14O95147 198 aaKnown RBP4.5□□□□□ -1.69
MUC1-227ENST00000615517 RANBP1P43487 201 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 SUPT4H1P63272 117 aaKnown RBP4.5□□□□□ -1.69
MUC1-227ENST00000615517 SPHARQ15513 63 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 LRTM2Q8N967 370 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 TMEM170AQ8WVE7 144 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 CYGBQ8WWM9 190 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 NPIPB3Q92617 1050 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 UFD1Q92890 307 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 PBDC1Q9BVG4 233 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 MND1Q9BWT6 205 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 FXYD6Q9H0Q3 95 aa4.5□□□□□ -1.69
MUC1-227ENST00000615517 RCL1Q9Y2P8 373 aaKnown RBP4.5□□□□□ -1.69
MUC1-227ENST00000615517 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.49□□□□□ -1.69
MUC1-227ENST00000615517 GPR31O00270 319 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 CASQ2O14958 399 aaPredicted RBP4.49□□□□□ -1.69
MUC1-227ENST00000615517 PAX4O43316 350 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 IGKV1-5P01602 117 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 HSMCR30P0CW71 290 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 PSMB9P28065 219 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 HERV-K104P61576 105 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 PHLDA2Q53GA4 152 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 C1orf194Q5T5A4 169 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 OR8G2PQ6IF36 304 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 SFXN4Q6P4A7 337 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 DHRS11Q6UWP2 260 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 Q6ZRU5 148 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 RNF182Q8N6D2 247 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 OR5AP2Q8NGF4 316 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 BORCS5Q969J3 196 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 ZNF2Q9BSG1 426 aaPredicted RBP4.49□□□□□ -1.69
MUC1-227ENST00000615517 PLCXD1Q9NUJ7 323 aa4.49□□□□□ -1.69
MUC1-227ENST00000615517 TRAV1-2A0A0B4J238 106 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 SMIM30A4D0T7 59 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 PDCD5O14737 125 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 LECT2O14960 151 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 CCNKO75909 580 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 IGLV2-11P01706 119 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 SLC25A4P12235 298 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 NUP62P37198 522 aaPredicted RBP4.48□□□□□ -1.69
MUC1-227ENST00000615517 RFX2P48378 723 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 TBC1D26Q86UD7 250 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 OR8I2Q8N0Y5 310 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 C10orf126Q8N4M7 172 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 SLC24A4Q8NFF2 622 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 RSG1Q9BU20 258 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 CCDC90BQ9GZT6 254 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 SLC25A32Q9H2D1 315 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 Q9HAA7 133 aa4.48□□□□□ -1.69
MUC1-227ENST00000615517 TRGV2A0A075B6R0 118 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 IGKV1D-37A0A075B6S9 117 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 A0A0G2JRQ6 117 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 MEIS3P1A6NDR6 274 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 SNURFLB1AK76 121 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 H7BYZ3 331 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 PRAF2O60831 178 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 GNAO1P09471 354 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 ZNF182P17025 639 aaPredicted RBP4.47□□□□□ -1.69
MUC1-227ENST00000615517 RAB3BP20337 219 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 HTR2BP41595 481 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 MEOX2P50222 304 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 CRYBA4P53673 196 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 TAS2R20P59543 309 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 RHOBP62745 196 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 HIST1H1AQ02539 215 aaPredicted RBP4.47□□□□□ -1.69
MUC1-227ENST00000615517 ZNF90Q03938 601 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 DAZ2Q13117 558 aaKnown RBP4.47□□□□□ -1.69
MUC1-227ENST00000615517 ASAH1Q13510 395 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 GAMTQ14353 236 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 TRAM1Q15629 374 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 MRPL23Q16540 153 aaKnown RBP4.47□□□□□ -1.69
MUC1-227ENST00000615517 ACOT6Q3I5F7 207 aaPredicted RBP4.47□□□□□ -1.69
MUC1-227ENST00000615517 C2orf83Q53S99 150 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 SAMD13Q5VXD3 122 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 NEGR1Q7Z3B1 354 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 ARRDC1Q8N5I2 433 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 ACY3Q96HD9 319 aa4.47□□□□□ -1.69
MUC1-227ENST00000615517 PARD6GQ9BYG4 376 aaPredicted RBP4.47□□□□□ -1.69
MUC1-227ENST00000615517 EHFQ9NZC4 300 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms