RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 USMG5Q96IX5 58 aa9.55□□□□□ -0.88
CBWD1-220ENST00000612045 OR4F4Q96R69 305 aa9.55□□□□□ -0.88
CBWD1-220ENST00000612045 ATP6V0BQ99437 205 aa9.55□□□□□ -0.88
CBWD1-220ENST00000612045 SLC25A39Q9BZJ4 359 aaPredicted RBP9.55□□□□□ -0.88
CBWD1-220ENST00000612045 KLK15Q9H2R5 256 aa9.55□□□□□ -0.88
CBWD1-220ENST00000612045 FAM74A7A6NL05 159 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 TGOLN2O43493 480 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 NDUFS6O75380 124 aaKnown RBP9.54□□□□□ -0.88
CBWD1-220ENST00000612045 OR10J4P0C629 311 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 ZNF329Q86UD4 541 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 STXBP6Q8NFX7 210 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 PAXXQ9BUH6 204 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 OR51M1Q9H341 326 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 YTHDF2Q9Y5A9 579 aaKnown RBP9.54□□□□□ -0.88
CBWD1-220ENST00000612045 PUS1Q9Y606 427 aaKnown RBP eCLIP9.54□□□□□ -0.88
CBWD1-220ENST00000612045 LY6G6DO95868 133 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 IGHG4P01861 327 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 PYYP10082 97 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 ATP5G3P48201 142 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 RAB9AP51151 201 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 UBE2L3P68036 154 aaKnown RBP9.54□□□□□ -0.88
CBWD1-220ENST00000612045 SCGB2A2Q13296 93 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 KIAA0141Q14154 515 aaPredicted RBP9.54□□□□□ -0.88
CBWD1-220ENST00000612045 USF2Q15853 346 aaPredicted RBP9.54□□□□□ -0.88
CBWD1-220ENST00000612045 LEMD1Q68G75 181 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 ZNF600Q6ZNG1 722 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 ZNF414Q96IQ9 312 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 TXNDC17Q9BRA2 123 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 GNB4Q9HAV0 340 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
CBWD1-220ENST00000612045 HIVEP2P31629 2446 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 TMEM250H0YL14 139 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 SCO1O75880 301 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 PSMB8P28062 276 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 FAM90A2PQ658T7 463 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 ATRAIDQ6UW56 229 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 LCNL1Q6ZST4 164 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 Q8N2B8 174 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 FXYD5Q96DB9 178 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 SHANK2-AS3Q9BTD1 123 aa9.53□□□□□ -0.88
CBWD1-220ENST00000612045 IGHV3-35A0A0C4DH35 117 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 A0A0G2JLM5 398 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 TMEM89A2RUT3 159 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 H3BRN7 92 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 PDE6DO43924 150 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 TOMM20LQ6UXN7 152 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 S100A7AQ86SG5 101 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 ESM1Q9NQ30 184 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 NF1P21359 2839 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 PPP5D1E7EU14 171 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 SNAPINO95295 136 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 GP9P14770 177 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 SRD5A1P18405 259 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 SLC35B1P78383 322 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 ZFAND3Q9H8U3 227 aa9.52□□□□□ -0.89
CBWD1-220ENST00000612045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.51□□□□□ -0.89
CBWD1-220ENST00000612045 A0A1W2PRE2 83 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 ZNF98A6NK75 572 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 BMPR1BO00238 502 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 IGHV3-11P01762 117 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 RELQ04864 619 aaPredicted RBP9.51□□□□□ -0.89
CBWD1-220ENST00000612045 NKX6-2Q9C056 277 aaPredicted RBP9.51□□□□□ -0.89
CBWD1-220ENST00000612045 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 CDC42EP3Q9UKI2 254 aa9.51□□□□□ -0.89
CBWD1-220ENST00000612045 IGHV3OR16-8A0A075B7F1 116 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 F6UZH7 168 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 CLDN34H7C241 214 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 TRBV12-3P01733 135 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 SNRPCP09234 159 aaKnown RBP9.5□□□□□ -0.89
CBWD1-220ENST00000612045 NPPCP23582 126 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 ARL3P36405 182 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 ZNF343Q6P1L6 599 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 TEX38Q6PEX7 206 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 CLRN3Q8NCR9 226 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 OR4X2Q8NGF9 303 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
CBWD1-220ENST00000612045 NIPSNAP3BQ9BS92 247 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 SERTAD4Q9NUC0 356 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 HIVEP1P15822 2718 aa9.5□□□□□ -0.89
CBWD1-220ENST00000612045 GGTLC3B5MD39 225 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 H3BQ15 152 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 NBEAP1P0C6P0 100 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 BPIFA4PQ86YQ2 179 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 BLNKQ8WV28 456 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 ZNF727A8MUV8 499 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 NDUFB4O95168 129 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 ELANEP08246 267 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 CD99P14209 185 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 SUMO1P63165 101 aaKnown RBP9.49□□□□□ -0.89
CBWD1-220ENST00000612045 FOXE3Q13461 319 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 ZNF674Q2M3X9 581 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 PARLQ9H300 379 aa9.49□□□□□ -0.89
CBWD1-220ENST00000612045 CLPSL1A2RUU4 121 aa9.48□□□□□ -0.89
CBWD1-220ENST00000612045 M0R036 132 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms