RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SPINK8P0C7L1 97 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 SRSF2Q01130 221 aaKnown RBP8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 HLA-DRB5Q30154 266 aa8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 YTHDF2Q9Y5A9 579 aaKnown RBP8.72□□□□□ -1.01
PCDHGC3-202ENST00000611950 IGHV1-18A0A0C4DH31 117 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 C15orf65H3BRN8 121 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 GRNP28799 593 aaKnown RBP8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 MLANAQ16655 118 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 ZNF718Q3SXZ3 478 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 RND1Q92730 232 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 MDFIC2A0A1B0GVS7 189 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 ERVK-16P61578 105 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 CISD2Q8N5K1 135 aaKnown RBP8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 OR5A1Q8NGJ0 315 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 KIR2DL5BQ8NHK3 375 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 OCC1Q8TAD7 63 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 HSD17B10Q99714 261 aaKnown RBP8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 GGTLC1Q9BX51 225 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 FBXL7Q9UJT9 491 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 SELENOKQ9Y6D0 94 aa8.71□□□□□ -1.02
PCDHGC3-202ENST00000611950 F2Z2F3 143 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 NUDT3O95989 172 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 HIST1H1EP10412 219 aaKnown RBP8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 ADMP35318 185 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 SRP14P37108 136 aaKnown RBP8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 TCL1AP56279 114 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 KCNIP4Q6PIL6 250 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 ZCCHC24Q8N2G6 241 aaKnown RBP8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 S1PR3Q99500 378 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 TCF19Q9Y242 345 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 CYSLTR1Q9Y271 337 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 ABCA4P78363 2273 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 RPL31P62899 125 aaKnown RBP8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 ACSF3Q4G176 576 aaPredicted RBP8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 IGFL2Q6UWQ7 119 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 CENPVQ7Z7K6 275 aaPredicted RBP8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 GCSAMQ8N6F7 178 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 SIGLEC9Q9Y336 463 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 MED13LQ71F56 2210 aa8.7□□□□□ -1.02
PCDHGC3-202ENST00000611950 DCHS2Q6V1P9 2916 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 IGLV1-44P01699 117 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 RHOBP62745 196 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 FXYD3Q14802 87 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 C12orf54Q6X4T0 127 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 ITLN1Q8WWA0 313 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 RNF114Q9Y508 228 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 TYMSP04818 313 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 PMCHP20382 165 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 ATP5G2Q06055 141 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 UNC79Q9P2D8 2635 aa8.69□□□□□ -1.02
PCDHGC3-202ENST00000611950 TRAV17A0A0B4J275 112 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 VWC2LB2RUY7 222 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 PRB4P10163 310 aaPredicted RBP8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 REG1BP48304 166 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 KRTDAPP60985 99 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 RELBQ01201 579 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 ZNF90Q03938 601 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 DEFB109BQ30KR1 87 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 HIST2H2BCQ6DN03 193 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 MIR17HGQ75NE6 70 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 STPG3Q8N7X2 389 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 OR2K2Q8NGT1 345 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 DDB2Q92466 427 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 C1orf159Q96HA4 380 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 FAM103A1Q9BTL3 118 aaKnown RBP8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 IFI27L2Q9H2X8 130 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 SAA2-SAA4A0A096LPE2 208 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 K7EN84 100 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 CA2P00918 260 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 CRYGBP07316 175 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 SAA2P0DJI9 122 aaPredicted RBP8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 LINC00310P59036 64 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 SEM1Q6ZVN7 128 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 ZADH2Q8N4Q0 377 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 ENY2Q9NPA8 101 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 SPANXA1Q9NS26 97 aa8.68□□□□□ -1.02
PCDHGC3-202ENST00000611950 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 C7orf71A4D174 169 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 RS1O15537 224 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 IER3P46695 156 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 PRB3Q04118 309 aaPredicted RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 MBNL2Q5VZF2 373 aaKnown RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 FAM216BQ8N7L0 139 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 NEUROG1Q92886 237 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CALYQ9NYX4 217 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 KBTBD11-OT1A0A1B0GTJ5 212 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 LOXL3P58215 753 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 VWC2Q2TAL6 325 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CT45A1Q5HYN5 189 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 C22orf34Q6ZV56 151 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CT45A3Q8NHU0 189 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 CCL13Q99616 98 aa8.67□□□□□ -1.02
PCDHGC3-202ENST00000611950 TP53TG3Q9ULZ0 132 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms