RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571		H3BUT2	72 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	MEF2C	Q06413	473 aa	Predicted RBP	11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	LDLRAD2	Q5SZI1	272 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	CACNG7	P62955	275 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	MPV17L2	Q567V2	206 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	CLEC19A	Q6UXS0	136 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	FAM57A	Q8TBR7	257 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571		B9A039	149 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	TSKU	Q8WUA8	353 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	WFDC12	Q8WWY7	111 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	RNF125	Q96EQ8	232 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	WNT2	P09544	360 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	LYPD6B	Q8NI32	183 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	FOXC2	Q99958	501 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	PSG8	Q9UQ74	426 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	USP9X	Q93008	2570 aa	Predicted RBP	11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	DLEU1	O43261	78 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	HIST1H1A	Q02539	215 aa	Predicted RBP	11.3	□□□□□ -0.6
MUC1-223	ENST00000611571		Q8TAT8	98 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	CHD8	Q9HCK8	2581 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	NPPC	P23582	126 aa		11.3	□□□□□ -0.6
MUC1-223	ENST00000611571	RPL15	P61313	204 aa	Known RBP	11.3	□□□□□ -0.6
MUC1-223	ENST00000611571		A0A087X0K7	114 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571		C9JCJ5	164 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	TGFA	P01135	160 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	KLRD1	Q13241	179 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	TRAV9-1	A0A075B6T8	112 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	DSCAML1	Q8TD84	2053 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	C2orf16	Q68DN1	1984 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	TYMS	P04818	313 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	RNASE2	P10153	161 aa	Known RBP	11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	TMPRSS3	P57727	454 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571		Q6ZWC4	215 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	OR10J6P	Q8NGY7	276 aa		11.29	□□□□□ -0.6
MUC1-223	ENST00000611571	ERVK11-1	P61568	191 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	ORMDL3	Q8N138	153 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	FMC1	Q96HJ9	113 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	WISP2	O76076	250 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	IGKV2D-40	P01614	121 aa	Predicted RBP	11.28	□□□□□ -0.6
MUC1-223	ENST00000611571		Q6ZVH6	145 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	FER1L6-AS1	Q8NA97	138 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	PRUNE2	Q8WUY3	3088 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	GGTLC3	B5MD39	225 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	NUPR1	O60356	82 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	DIAPH2-AS1	Q14236	149 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	SAPCD1	Q5SSQ6	148 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	AMMECR1L	Q6DCA0	310 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	FAM71F2	Q6NXP2	309 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	DPF1	Q92782	380 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	GAFA1	Q96PS6	74 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	C2orf88	Q9BSF0	95 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	FBLN7	Q53RD9	439 aa		11.28	□□□□□ -0.6
MUC1-223	ENST00000611571	HIVEP3	Q5T1R4	2406 aa		11.27	□□□□□ -0.6
MUC1-223	ENST00000611571	NAV3	Q8IVL0	2385 aa		11.27	□□□□□ -0.6
MUC1-223	ENST00000611571		A0A1W2PS18	150 aa		11.27	□□□□□ -0.6
MUC1-223	ENST00000611571	FAM181B	A6NEQ2	426 aa		11.27	□□□□□ -0.6
MUC1-223	ENST00000611571	BEND2	Q8NDZ0	799 aa		11.27	□□□□□ -0.6
MUC1-223	ENST00000611571	IGHV3OR16-12	A0A075B7B8	117 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	TRAV30	A0A087WSZ9	112 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	ARPC1A	Q92747	370 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	ZNF257	Q9Y2Q1	563 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571		H0YJW9	148 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	SMKR1	H3BMG3	65 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	NDUFA3	O95167	84 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	CNTFR	P26992	372 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	TDRG1	Q3Y452	100 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	IGFBPL1	Q8WX77	278 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	CFAP54	Q96N23	3096 aa		11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	PEF1	Q9UBV8	284 aa	Known RBP	11.27	□□□□□ -0.61
MUC1-223	ENST00000611571	TCRA	P04437	139 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	NPS	P0C0P6	89 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	PSG9	Q00887	426 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	OR10J3	Q5JRS4	329 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	BEX4	Q9NWD9	120 aa	Predicted RBP	11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	SRRM4	A7MD48	611 aa	Known RBP	11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	TMEM30B	Q3MIR4	351 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	DENND4A	Q7Z401	1863 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	NBR2	O15453	112 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	SRD5A1	P18405	259 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	TDGF1P3	P51864	188 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	DLX6	P56179	175 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	LURAP1L	Q8IV03	231 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	MEGF9	Q9H1U4	602 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	CHODL	Q9H9P2	273 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	JKAMP	Q9P055	326 aa		11.26	□□□□□ -0.61
MUC1-223	ENST00000611571	TRGV3	P03979	118 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	IGHV1-8	P0DP01	117 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	TSPO	P30536	169 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	VDAC2	P45880	294 aa	Predicted RBP	11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	SLA	Q13239	276 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	OTOR	Q9NRC9	128 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	SPTBN4	Q9H254	2564 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571		A0A1W2PPI3	338 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	DKK1	O94907	266 aa		11.25	□□□□□ -0.61
MUC1-223	ENST00000611571	SPRN	Q5BIV9	151 aa		11.25	□□□□□ -0.61

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