RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 FOXE3Q13461 319 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 ZADH2Q8N4Q0 377 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 TMEM116Q8NCL8 245 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 ZNF596Q8TC21 504 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 A0A087X0K7 114 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 NKX6-3A6NJ46 265 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 OR1L4Q8NGR5 311 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 Q9H3A6 140 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 GAL3ST2Q9H3Q3 398 aa16.38■□□□□ 0.21
SSBP3-216ENST00000610401 TMEM265A0A087WTH1 108 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 CFHR2P36980 270 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 HBBP68871 147 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 LOXL4Q96JB6 756 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 RAB9BQ9NP90 201 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 LINC00614P0C842 121 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 WFDC3Q8IUB2 231 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 TEX45Q8NA69 505 aa16.37■□□□□ 0.21
SSBP3-216ENST00000610401 OSR1Q8TAX0 266 aaPredicted RBP16.37■□□□□ 0.21
SSBP3-216ENST00000610401 IGHV1-24A0A0C4DH33 117 aa16.36■□□□□ 0.21
SSBP3-216ENST00000610401 MRPL32Q9BYC8 188 aaKnown RBP16.36■□□□□ 0.21
SSBP3-216ENST00000610401 SERTM2A0A1B0GWG4 89 aa16.36■□□□□ 0.21
SSBP3-216ENST00000610401 KLF17Q5JT82 389 aaPredicted RBP16.36■□□□□ 0.21
SSBP3-216ENST00000610401 ZNF738Q8NE65 137 aa16.36■□□□□ 0.21
SSBP3-216ENST00000610401 PLA2G2CQ5R387 149 aa16.36■□□□□ 0.21
SSBP3-216ENST00000610401 GPR82Q96P67 336 aa16.36■□□□□ 0.21
SSBP3-216ENST00000610401 RPP21Q9H633 154 aaKnown RBP16.36■□□□□ 0.21
SSBP3-216ENST00000610401 LINC00312Q9Y6C7 94 aa16.36■□□□□ 0.21
SSBP3-216ENST00000610401 ANKHD1Q8IWZ3 2542 aaKnown RBP16.35■□□□□ 0.21
SSBP3-216ENST00000610401 IGHV3-35A0A0C4DH35 117 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 HTR1DP28221 377 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 UQCRFS1P47985 274 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 SUB1P53999 127 aaKnown RBP eCLIP16.35■□□□□ 0.21
SSBP3-216ENST00000610401 BSPH1Q075Z2 132 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 POU2AF1Q16633 256 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 FBXL15Q9H469 300 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 OR2T8A6NH00 312 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 FAM222BQ8WU58 562 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 SRSF12Q8WXF0 261 aaKnown RBP16.35■□□□□ 0.21
SSBP3-216ENST00000610401 ZFHX3Q15911 3703 aa16.35■□□□□ 0.21
SSBP3-216ENST00000610401 IGLV3-9A0A075B6K5 115 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 CACNG8Q8WXS5 425 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 TMUB1Q9BVT8 246 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 COX11Q9Y6N1 276 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 NDUFB3O43676 98 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 ZNF833PQ6ZTB9 187 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 PPIAL4EA0A075B759 164 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 PPIAL4DF5H284 164 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 PPIAL4FP0DN26 164 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 PERPQ96FX8 193 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 CTSZQ9UBR2 303 aa16.34■□□□□ 0.21
SSBP3-216ENST00000610401 M0R3E3 92 aa16.33■□□□□ 0.21
SSBP3-216ENST00000610401 OR5AN1Q8NGI8 311 aa16.33■□□□□ 0.21
SSBP3-216ENST00000610401 C19orf24Q9BVV8 132 aa16.33■□□□□ 0.2
SSBP3-216ENST00000610401 DYNLRB1Q9NP97 96 aa16.33■□□□□ 0.2
SSBP3-216ENST00000610401 OR4F17Q8NGA8 305 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 MBD3L4A6NDZ8 208 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-216ENST00000610401 MBD3L3A6NE82 208 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-216ENST00000610401 MBD3L5A6NJ08 208 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-216ENST00000610401 FAM106CPP0CH98 169 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 PSG1P11464 419 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 TNFRSF1AP19438 455 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 ADIPOQQ15848 244 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 VMA21Q3ZAQ7 101 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 FAM106AQ4KMX7 169 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 FBLN7Q53RD9 439 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 MBD3L2Q8NHZ7 208 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-216ENST00000610401 A8MWL6 223 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 LY6HO94772 140 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 IGHV3-23P01764 117 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 COX19Q49B96 90 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 OR8A1Q8NGG7 326 aa16.32■□□□□ 0.2
SSBP3-216ENST00000610401 MRPL27Q9P0M9 148 aaKnown RBP16.32■□□□□ 0.2
SSBP3-216ENST00000610401 SYS1-DBNDD2H3BUS1 97 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 CNIH1O95406 144 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 ARMS2P0C7Q2 107 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 BCL6BQ8N143 479 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-216ENST00000610401 PNKDQ8N490 385 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 PRSS33Q8NF86 280 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 IGHV2-26A0A0B4J1V2 119 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 C17orf100A8MU93 164 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 TCRAP04437 139 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 IGFL4Q6B9Z1 124 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 IGF2RP11717 2491 aa16.31■□□□□ 0.2
SSBP3-216ENST00000610401 IGLV2-23P01705 113 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 RPL27AP46776 148 aaKnown RBP16.3■□□□□ 0.2
SSBP3-216ENST00000610401 LRRC10Q5BKY1 277 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 CUBNO60494 3623 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 HSBP1L1C9JCN9 74 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 UBE2V1Q13404 147 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 TMEM108Q6UXF1 575 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 MUC15Q8N387 334 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 TMEM167AQ8TBQ9 72 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 C22orf15Q8WYQ4 148 aa16.3■□□□□ 0.2
SSBP3-216ENST00000610401 FNDC10F2Z333 226 aa16.29■□□□□ 0.2
SSBP3-216ENST00000610401 FSTL3O95633 263 aa16.29■□□□□ 0.2
SSBP3-216ENST00000610401 C1orf185Q5T7R7 199 aa16.29■□□□□ 0.2
SSBP3-216ENST00000610401 CUL9Q8IWT3 2517 aa16.29■□□□□ 0.2
SSBP3-216ENST00000610401 ITGB1BP1O14713 200 aa16.29■□□□□ 0.2
SSBP3-216ENST00000610401 TM4SF5O14894 197 aa16.29■□□□□ 0.2
SSBP3-216ENST00000610401 AMMECR1LQ6DCA0 310 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms