RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MAL2Q969L2 176 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 SNX12Q9UMY4 172 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 TRIP11Q15643 1979 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 DOCK4Q8N1I0 1966 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 RGS12O14924 1447 aa2.15□□□□□ -2.07
SMCHD1-213ENST00000609587 DSCAML1Q8TD84 2053 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 NCAPD3P42695 1498 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 ANKRD31Q8N7Z5 1873 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 MAPKBP1O60336 1514 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 IGKV3D-11A0A0A0MRZ8 115 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 IGKV1-9A0A0C4DH69 117 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 FAM236AA0A1B0GUQ0 79 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 FAM236BA0A1B0GV22 79 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 A0A1B0GW54 56 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 IRGMA1A4Y4 181 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF860A6NHJ4 632 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 BUB1B-PAK6H3BSN5 160 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 J3QR89 54 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 LYZL6O75951 148 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 SRP19P09132 144 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 OR5AC1P0C628 307 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF83P51522 516 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 LYRM7Q5U5X0 104 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 AMTNQ6UX39 209 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 SLC35E3Q7Z769 313 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 TRAPPC6BQ86SZ2 158 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 LINC00311Q8N616 119 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 FER1L6-AS1Q8NA97 138 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 C5orf17Q8NAS9 161 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 OR2T10Q8NGZ9 312 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 RAB2BQ8WUD1 216 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 MAGOHBQ96A72 148 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 SOX21Q9Y651 276 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 V9GYS6 101 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 NAIPQ13075 1403 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 RRBP1Q9P2E9 1410 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 SCN4AP35499 1836 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 ADGRB1O14514 1584 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF638Q14966 1978 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 DSPPQ9NZW4 1301 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 IFT140Q96RY7 1462 aa2.14□□□□□ -2.07
SMCHD1-213ENST00000609587 TRPM1Q7Z4N2 1603 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 TRAV27A0A087WT01 109 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 MEIS3P1A6NDR6 274 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 FNDC10F2Z333 226 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 UBFD1O14562 309 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 UBE2L6O14933 153 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 SOD1P00441 154 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 CGB3P0DN86 165 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 CGB7P0DN87 165 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 NFYBP25208 207 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 RNASE4P34096 147 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 AQP4P55087 323 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 MEIG1Q5JSS6 88 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 LAIR2Q6ISS4 152 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 C22orf39Q6P5X5 142 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 LCN15Q6UWW0 184 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 SCXQ7RTU7 201 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 C10orf126Q8N4M7 172 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 OR5D14Q8NGL3 314 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 DPH3Q96FX2 82 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 MED9Q9NWA0 146 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 CCDC167Q9P0B6 97 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 KDM5CP41229 1560 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 CCDC141Q6ZP82 1450 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 LOXHD1Q8IVV2 1947 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 ALPK3Q96L96 1907 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 ATG2BQ96BY7 2078 aa2.13□□□□□ -2.07
SMCHD1-213ENST00000609587 PSME4Q14997 1843 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 NUP210LQ5VU65 1888 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 NSD3Q9BZ95 1437 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 IGHV3-43A0A0B4J1X8 118 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 A0A0G2JMM0 328 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TRBV27A0A0K0K1C4 114 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 SMIM31A0A1B0GVY4 71 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 A0A1W2PPB8 328 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 C7orf71A4D174 169 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 KIR3DP1A8MWS1 328 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TMEM256-PLSCR3K7ERE1 68 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 PITX3O75364 302 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 NDUFB2O95178 105 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BOP23527 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BBP33778 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 SDC2P34741 201 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 NUDT2P50583 147 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 RBM11P57052 281 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BDP58876 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BCP62807 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST2H2BEQ16778 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 LINC01554Q52M75 96 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 BRD3OSQ6XYD6 125 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 LINC00305Q7Z4B0 112 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 Q8N2B8 174 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 C10orf111Q8N326 155 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TTC9CQ8N5M4 171 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 STAG3L4Q8TBR4 150 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 ITLN2Q8WWU7 325 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BHQ93079 126 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms