RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 ZNF705BP0CI00 300 aaPredicted RBP4.51□□□□□ -1.69
CUX1-220ENST00000607092 AKAIN1P0CW23 69 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 BTCP35070 178 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 HRH1P35367 487 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 ATP5IP56385 69 aaPredicted RBP4.51□□□□□ -1.69
CUX1-220ENST00000607092 SPCS3P61009 180 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 RND3P61587 244 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 B2MP61769 119 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 RRAS2P62070 204 aaPredicted RBP4.51□□□□□ -1.69
CUX1-220ENST00000607092 MEF2DQ14814 521 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 C16orf54Q6UWD8 224 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 GSG1LQ6UXU4 331 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 SIGLEC15Q6ZMC9 328 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 Q6ZRM9 215 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 TCTE3Q8IZS6 198 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 ARRDC1Q8N5I2 433 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 FAM24BQ8N5W8 94 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 OR52E5Q8NH55 327 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 ZFAND1Q8TCF1 268 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 ST6GAL2Q96JF0 529 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 FXYD6Q9H0Q3 95 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 GPN1Q9HCN4 374 aaPredicted RBP4.51□□□□□ -1.69
CUX1-220ENST00000607092 MCUBQ9NWR8 336 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 CLEC5AQ9NY25 188 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 XCL2Q9UBD3 114 aa4.51□□□□□ -1.69
CUX1-220ENST00000607092 DYNC1H1Q14204 4646 aaKnown RBP4.5□□□□□ -1.69
CUX1-220ENST00000607092 C16orf90A8MZG2 172 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 DISC1C4P0D8 188 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 IGKV1-17P01599 117 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 IL4P05112 153 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 FCER2P06734 321 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 RD3LP0DJH9 198 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 RNASE2P10153 161 aaKnown RBP4.5□□□□□ -1.69
CUX1-220ENST00000607092 PGAM2P15259 253 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
CUX1-220ENST00000607092 OR10J1P30954 320 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 MEOX2P50222 304 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 RRN3P1Q2M238 152 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 C1orf194Q5T5A4 169 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 OR8G2PQ6IF36 304 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 STEAP1BQ6NZ63 245 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 EBLN2Q6P2I7 272 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 FOXI2Q6ZQN5 318 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 COQ8AQ8NI60 647 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 GLMPQ8WWB7 406 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 ASB13Q8WXK3 278 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 MED28Q9H204 178 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 HEYLQ9NQ87 328 aaPredicted RBP4.5□□□□□ -1.69
CUX1-220ENST00000607092 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.5□□□□□ -1.69
CUX1-220ENST00000607092 DKK2Q9UBU2 259 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 SCP2D1Q9UJQ7 156 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 CELA1Q9UNI1 258 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 ALG5Q9Y673 324 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 AGRNO00468 2067 aa4.5□□□□□ -1.69
CUX1-220ENST00000607092 IGLV2-18A0A075B6J9 118 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 A0A0B4J293 547 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 C3orf85A0A1B0GTC6 90 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 MEIS3P1A6NDR6 274 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 LYRM9A8MSI8 78 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 BOLA2-SMG1P6H3BVE0 249 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 ISLRO14498 428 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 BUB3O43684 328 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 RAB3DO95716 219 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 CFDP00746 253 aaPredicted RBP4.49□□□□□ -1.69
CUX1-220ENST00000607092 C1QBP02746 253 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 IGLC1P0CG04 106 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 PSMB3P49720 205 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 EMP1P54849 157 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 CCL18P55774 89 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 DAD1P61803 113 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 DHODHQ02127 395 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 BSXQ3C1V8 233 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 TIGITQ495A1 244 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 ZFP69Q49AA0 526 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 AARDQ4LEZ3 155 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 C2orf83Q53S99 150 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 RNASE10Q5GAN6 216 aaKnown RBP4.49□□□□□ -1.69
CUX1-220ENST00000607092 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 FAM222AQ5U5X8 452 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
CUX1-220ENST00000607092 OR51G1Q8NGK1 321 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 OR4C16Q8NGL9 310 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 HYLS1Q96M11 299 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 SCGB3A2Q96PL1 93 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 PRRT1Q99946 306 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 TMEM208Q9BTX3 173 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 SAV1Q9H4B6 383 aaPredicted RBP4.49□□□□□ -1.69
CUX1-220ENST00000607092 NUDT15Q9NV35 164 aa4.49□□□□□ -1.69
CUX1-220ENST00000607092 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 TRAV6A0A075B6T7 132 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 LOC102723971A0A1B0GUV8 181 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 TOMM40O96008 361 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 IGKV1-39P01597 117 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 IGKV1-5P01602 117 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 CD3DP04234 171 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 IGKV1D-39P04432 117 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 P0C879 139 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 SULT1A3P0DMM9 295 aa4.48□□□□□ -1.69
CUX1-220ENST00000607092 SULT1A4P0DMN0 295 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms