RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 TRBV6-4A0A1B0GX49 114 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 J3QRK9 145 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 CCL16O15467 120 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 TIMM17BO60830 172 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 DHFRP00374 187 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 ANP32AP39687 249 aaKnown RBP0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 ROMO1P60602 79 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 RRN3P1Q2M238 152 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 PDZD9Q8IXQ8 264 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 ITFG2Q969R8 447 aa0.55□□□□□ -2.32
RNU6-88P-201ENST00000606801 MYH3P11055 1940 aa0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 TRBV19A0A075B6N1 114 aa0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 CST2P09228 141 aa0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 ERP29P30040 261 aaKnown RBP0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 EIF5AP63241 154 aaKnown RBP0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 SBSPONQ8IVN8 264 aa0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 BORCS5Q969J3 196 aa0.54□□□□□ -2.32
RNU6-88P-201ENST00000606801 DNAL4O96015 105 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 SRP14P37108 136 aaKnown RBP0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 KRR1Q13601 381 aaKnown RBP0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 LIN52Q52LA3 116 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 LYRM7Q5U5X0 104 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 C22orf39Q6P5X5 142 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 GNPDA2Q8TDQ7 276 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 C4orf3Q8WVX3 66 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 TMEM70Q9BUB7 260 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 KIFC1Q9BW19 673 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 TAS2R7Q9NYW3 318 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 MUC4Q99102 2169 aa0.53□□□□□ -2.32
RNU6-88P-201ENST00000606801 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 TCRBV4S1A1TA0A5B7 111 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 NDUFB3O43676 98 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 IFNA6P05013 189 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 EFNA4P52798 201 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 PSG9Q00887 426 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 FADDQ13158 208 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 KRTAP26-1Q6PEX3 210 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 ZNF833PQ6ZTB9 187 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 S100A7AQ86SG5 101 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 MNS1Q8NEH6 495 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 OR2T35Q8NGX2 323 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 OR10K1Q8NGX5 313 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 TMEM254Q8TBM7 123 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 NMNAT1Q9HAN9 279 aaPredicted RBP0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 USP24Q9UPU5 2620 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 TNS3Q68CZ2 1445 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 MGAMO43451 1857 aa0.52□□□□□ -2.33
RNU6-88P-201ENST00000606801 M0R378 163 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 TAX1BP3O14907 124 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 NCR3O14931 201 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 KLF7O75840 302 aaPredicted RBP0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 HOXA6P31267 233 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 FAM74A1Q5RGS3 127 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 LINC00322Q6ZN03 302 aaPredicted RBP0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 GOLT1AQ6ZVE7 132 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 OR10X1Q8NGY0 326 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 DGCR14Q96DF8 476 aaKnown RBP0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 BTF3L4Q96K17 158 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 LINC00052Q96N35 136 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 GPER1Q99527 375 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 CECR2Q9BXF3 1484 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 ENY2Q9NPA8 101 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 FAM32AQ9Y421 112 aaKnown RBP0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 FRAS1Q86XX4 4008 aa0.51□□□□□ -2.33
RNU6-88P-201ENST00000606801 KNTC1P50748 2209 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 MIA2Q96PC5 1412 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 TRGV10A0A0A0MS01 117 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 IGHV1-58A0A0C4DH39 117 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 TMEM256-PLSCR3K7ERE1 68 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 C1QBP02746 253 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 ST6GALNAC3Q8NDV1 305 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 SLC25A21Q9BQT8 299 aaPredicted RBP0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 LINC00467Q9BRT7 94 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 NAV3Q8IVL0 2385 aa0.5□□□□□ -2.33
RNU6-88P-201ENST00000606801 ADGRL3Q9HAR2 1447 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 PTPRDP23468 1912 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 TLCD2A6NGC4 264 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 A8MWV9 139 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 HMGB3O15347 200 aaKnown RBP0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 NUPR1O60356 82 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 E2F6O75461 281 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 IGLV1-51P01701 117 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 S100A6P06703 90 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 CD2P06729 351 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 GRINAQ7Z429 371 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 Q8TAT8 98 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 YPEL2Q96QA6 119 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 C9orf16Q9BUW7 83 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 PCTPQ9UKL6 214 aa0.49□□□□□ -2.33
RNU6-88P-201ENST00000606801 TRAV10A0A0B4J240 114 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 SERPINA1P01009 418 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 CAPZBP47756 277 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 DSCR4P56555 118 aaPredicted RBP0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 HSPE1P61604 102 aaKnown RBP0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 UBE2BP63146 152 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 SPA17Q15506 151 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 TAF1AQ15573 450 aaPredicted RBP0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 PATE2Q6UY27 113 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 EXOC3-AS1Q8N2X6 119 aa0.48□□□□□ -2.33
RNU6-88P-201ENST00000606801 TP53RKQ96S44 253 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms