RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SPRNQ5BIV9 151 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 KIAA2026Q5HYC2 2103 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 LHFPL1Q86WI0 220 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 OR10G8Q8NGN5 311 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 RFESDQ8TAC1 157 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 NT5CQ8TCD5 201 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 PPDPFLQ8WWR9 84 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 RAB37Q96AX2 223 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 SPANXDQ9BXN6 97 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 LIME1Q9H400 295 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 DAZ1Q9NQZ3 744 aaKnown RBP3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 GREB1Q4ZG55 1949 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 ANAPC1Q9H1A4 1944 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 MDFIC2A0A1B0GVS7 189 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 A0A1B0GWB2 263 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 PLAC8L1A1L4L8 177 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 EGR2P11161 476 aaPredicted RBP3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 CNTFRP26992 372 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 PSMB3P49720 205 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 Q96M85 177 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 MCHR1Q99705 422 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 IL36BQ9NZH7 164 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 Q9Y3F1 56 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 TRIOBPQ9H2D6 2365 aa3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 TCF20Q9UGU0 1960 aaKnown RBP3.96□□□□□ -1.78
SPTBN1-206ENST00000602898 SCN2AQ99250 2005 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 MYO16Q9Y6X6 1858 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 RBP4P02753 201 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 LGALS1P09382 135 aaKnown RBP3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 CTLA4P16410 223 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 NMUP48645 174 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 BRWD1-AS2P59051 145 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF90Q03938 601 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 REG3AQ06141 175 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 PAX8Q06710 450 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 CENPWQ5EE01 88 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 ACP7Q6ZNF0 438 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 Q6ZS49 121 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 CIARTQ8N365 385 aaPredicted RBP3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 FAM19A2Q8N3H0 131 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 LY6G5BQ8NDX9 201 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 OR51H1Q8NH63 302 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 PFN4Q8NHR9 129 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 OTOSQ8NHW6 89 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 C11orf1Q9H5F2 150 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 RPUSD1Q9UJJ7 312 aaKnown RBP3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 PROCRQ9UNN8 238 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 IGLV1-36A0A0B4J1U3 117 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 A0A0J9YW62 118 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 A0A1B0GXF2 115 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 FAM24AA6NFZ4 105 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 PRR32B1ATL7 298 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 LMX1BO60663 402 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 HLA-DQA1P01909 254 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 APCSP02743 223 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF688P0C7X2 276 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF20P17024 532 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 HERVK_113P63121 156 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 DPTQ07507 201 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 Q5XG85 94 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 OR11H6Q8NGC7 330 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 ABHD14BQ96IU4 210 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 C9orf85Q96MD7 179 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 C21orf62Q9NYP8 219 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 KLF13Q9Y2Y9 288 aaPredicted RBP3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 HILPDAQ9Y5L2 63 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 PTPRDP23468 1912 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 DIDO1Q9BTC0 2240 aaKnown RBP3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 KIAA1549Q9HCM3 1950 aa3.95□□□□□ -1.78
SPTBN1-206ENST00000602898 TRAV27A0A087WT01 109 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 TRAV26-2A0A0B4J265 109 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC00473A8K010 186 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 NAPSAO96009 420 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 CCL1P22362 96 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 ANKRD29Q8N6D5 301 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF689Q96CS4 500 aaPredicted RBP3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 FAM218AQ96MZ4 157 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 PRSS27Q9BQR3 290 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 PLXNB3Q9ULL4 1909 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 TRAV8-4A0A0B4J246 113 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 C5orf67F2Z3F1 127 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 DUSP14O95147 198 aaKnown RBP3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 FKBP2P26885 142 aaKnown RBP3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 HBG1P69891 147 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 HBG2P69892 147 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 ATP1A1-AS1Q5TC04 95 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 GVQW1Q8N7I0 195 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 OR10AC1Q8NH08 325 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 H3BSH0 61 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 WT1P19544 449 aaPredicted RBP3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 SERF2P84101 59 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 MLF2Q15773 248 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms