RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ELOA3CA0A087WX78 387 aaPredicted RBP11.42□□□□□ -0.58
VRK3-221ENST00000600284 ISLRO14498 428 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 SOCS3O14543 225 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 MEOX2P50222 304 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 BAK1Q16611 211 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 SPANXN5Q5MJ07 72 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 NEU1Q99519 415 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 WDR12Q9GZL7 423 aaKnown RBP11.42□□□□□ -0.58
VRK3-221ENST00000600284 SAV1Q9H4B6 383 aaPredicted RBP11.42□□□□□ -0.58
VRK3-221ENST00000600284 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
VRK3-221ENST00000600284 CENPXA8MT69 81 aa11.41□□□□□ -0.58
VRK3-221ENST00000600284 IFNA21P01568 189 aa11.41□□□□□ -0.58
VRK3-221ENST00000600284 CNPY1Q3B7I2 92 aa11.41□□□□□ -0.58
VRK3-221ENST00000600284 BPIFCQ8NFQ6 507 aa11.41□□□□□ -0.58
VRK3-221ENST00000600284 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
VRK3-221ENST00000600284 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
VRK3-221ENST00000600284 C7orf50Q9BRJ6 194 aaKnown RBP11.41□□□□□ -0.58
VRK3-221ENST00000600284 TRAV10A0A0B4J240 114 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 IGLL5B9A064 214 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 ADAP1O75689 374 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 OR4E1P0C645 316 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 GALR1P47211 349 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 ZNF705AQ6ZN79 300 aaPredicted RBP11.4□□□□□ -0.58
VRK3-221ENST00000600284 TMEM144Q7Z5S9 345 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 RPP25LQ8N5L8 163 aaKnown RBP11.4□□□□□ -0.58
VRK3-221ENST00000600284 GPR82Q96P67 336 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 APLNQ9ULZ1 77 aa11.4□□□□□ -0.58
VRK3-221ENST00000600284 ZNF98A6NK75 572 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 PAX9P55771 341 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 POLR2GP62487 172 aaKnown RBP eCLIP11.39□□□□□ -0.59
VRK3-221ENST00000600284 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 EBLN2Q6P2I7 272 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 Q6ZTC4 211 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 SDHCQ99643 169 aaPredicted RBP11.39□□□□□ -0.59
VRK3-221ENST00000600284 PSENENQ9NZ42 101 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 FLVCR2Q9UPI3 526 aa11.39□□□□□ -0.59
VRK3-221ENST00000600284 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 ZNF705FA8MVS1 300 aaPredicted RBP11.38□□□□□ -0.59
VRK3-221ENST00000600284 H3BP45 60 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
VRK3-221ENST00000600284 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
VRK3-221ENST00000600284 AKR1C1Q04828 323 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 ACOT7LQ6ZUV0 252 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 OR1B1Q8NGR6 318 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 TMEM147Q9BVK8 224 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 RPRMQ9NS64 109 aa11.38□□□□□ -0.59
VRK3-221ENST00000600284 A0A0J9YX75 114 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 DEDDO75618 318 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 ORM2P19652 201 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 BTCP35070 178 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 C12orf74Q32Q52 190 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 C4orf46Q504U0 113 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 TMEM182Q6ZP80 229 aaPredicted RBP11.37□□□□□ -0.59
VRK3-221ENST00000600284 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 OR4B1Q8NGF8 309 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 RSG1Q9BU20 258 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 RNF126Q9BV68 326 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 SLC25A32Q9H2D1 315 aa11.37□□□□□ -0.59
VRK3-221ENST00000600284 PMS2P5A8MQ11 134 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 FNDC10F2Z333 226 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 IGKV3-20P01619 116 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 IL7P13232 177 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 GATA2P23769 480 aaPredicted RBP11.36□□□□□ -0.59
VRK3-221ENST00000600284 TAS2R30P59541 319 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 DEFB1P60022 68 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 PLP1P60201 277 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 SELENOTP62341 195 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 PSG9Q00887 426 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 CYP2G1PQ6ZSU1 146 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 S100A7AQ86SG5 101 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 SLC25A22Q9H936 323 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 NPVFQ9HCQ7 196 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 CELA1Q9UNI1 258 aa11.36□□□□□ -0.59
VRK3-221ENST00000600284 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 LINC00854A0A1B0GVQ3 168 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 SMCO3A2RU48 225 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 A8MTW9 85 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 SSSCA1O60232 199 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 IL5P05113 134 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 SPART-AS1P0CW21 52 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 ANXA7P20073 488 aaKnown RBP11.35□□□□□ -0.59
VRK3-221ENST00000600284 DLK1P80370 383 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 FAM78BQ5VT40 261 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 C17orf77Q96MU5 243 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 NDUFA13Q9P0J0 144 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 DOK5Q9P104 306 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 RFNGQ9Y644 331 aa11.35□□□□□ -0.59
VRK3-221ENST00000600284 DEFB131BA0A096LNP1 70 aa11.34□□□□□ -0.59
VRK3-221ENST00000600284 TEX48A0A1B0GUV7 120 aa11.34□□□□□ -0.59
VRK3-221ENST00000600284 H3BRN7 92 aa11.34□□□□□ -0.59
VRK3-221ENST00000600284 TSC22D2O75157 780 aa11.34□□□□□ -0.59
VRK3-221ENST00000600284 FXYD7P58549 80 aa11.34□□□□□ -0.59
VRK3-221ENST00000600284 RAP2BP61225 183 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms