RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 RD3LP0DJH9 198 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 PSG1P11464 419 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 CXCL3P19876 107 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 RBMY1FQ15415 496 aaKnown RBP16.63■□□□□ 0.25
CCDC61-207ENST00000599044 ETFRF1Q6IPR1 90 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 RAB40CQ96S21 281 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 MED28Q9H204 178 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 RCL1Q9Y2P8 373 aaKnown RBP16.63■□□□□ 0.25
CCDC61-207ENST00000599044 VPS13DQ5THJ4 4388 aa16.63■□□□□ 0.25
CCDC61-207ENST00000599044 AGRNO00468 2067 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 HELTA6NFD8 242 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 BUB3O43684 328 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 SSSCA1O60232 199 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 PSMG4Q5JS54 123 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 OR11H7Q8NGC8 314 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 OR51G1Q8NGK1 321 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 CLEC5AQ9NY25 188 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 U3KQ87 197 aa16.62■□□□□ 0.25
CCDC61-207ENST00000599044 K7EPK0 472 aa16.61■□□□□ 0.25
CCDC61-207ENST00000599044 DEDDO75618 318 aa16.61■□□□□ 0.25
CCDC61-207ENST00000599044 PAX9P55771 341 aa16.61■□□□□ 0.25
CCDC61-207ENST00000599044 RAB32Q13637 225 aa16.61■□□□□ 0.25
CCDC61-207ENST00000599044 NOXA1Q86UR1 476 aa16.61■□□□□ 0.25
CCDC61-207ENST00000599044 LSM5Q9Y4Y9 91 aaKnown RBP16.61■□□□□ 0.25
CCDC61-207ENST00000599044 X6R8D5 127 aa16.61■□□□□ 0.25
CCDC61-207ENST00000599044 DNAH10Q8IVF4 4471 aa16.6■□□□□ 0.25
CCDC61-207ENST00000599044 IGKV1D-37A0A075B6S9 117 aa16.6■□□□□ 0.25
CCDC61-207ENST00000599044 IGHV4-28A0A0C4DH34 117 aa16.6■□□□□ 0.25
CCDC61-207ENST00000599044 SPP1P10451 314 aa16.6■□□□□ 0.25
CCDC61-207ENST00000599044 RRAS2P62070 204 aaPredicted RBP16.6■□□□□ 0.25
CCDC61-207ENST00000599044 MORN3Q6PF18 240 aaPredicted RBP16.6■□□□□ 0.25
CCDC61-207ENST00000599044 CSNK1G2-AS1Q8NCQ2 148 aa16.6■□□□□ 0.25
CCDC61-207ENST00000599044 CIB3Q96Q77 187 aaPredicted RBP16.6■□□□□ 0.25
CCDC61-207ENST00000599044 MFFQ9GZY8 342 aa16.6■□□□□ 0.25
CCDC61-207ENST00000599044 H3BP45 60 aa16.59■□□□□ 0.25
CCDC61-207ENST00000599044 IFNA4P05014 189 aa16.59■□□□□ 0.25
CCDC61-207ENST00000599044 EIF2B2P49770 351 aaKnown RBP16.59■□□□□ 0.25
CCDC61-207ENST00000599044 AP2S1P53680 142 aaPredicted RBP16.59■□□□□ 0.25
CCDC61-207ENST00000599044 ZNF90Q03938 601 aa16.59■□□□□ 0.25
CCDC61-207ENST00000599044 GAMTQ14353 236 aa16.59■□□□□ 0.25
CCDC61-207ENST00000599044 NMES1Q9C002 83 aa16.59■□□□□ 0.25
CCDC61-207ENST00000599044 C11orf1Q9H5F2 150 aa16.59■□□□□ 0.25
CCDC61-207ENST00000599044 ZNF705EA8MWA4 302 aaPredicted RBP16.58■□□□□ 0.24
CCDC61-207ENST00000599044 S100A10P60903 97 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 SPANXN5Q5MJ07 72 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 LGALS9CQ6DKI2 356 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 SIGLEC15Q6ZMC9 328 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 Q6ZNX1 250 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 SMIM8Q96KF7 97 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 PSENENQ9NZ42 101 aa16.58■□□□□ 0.24
CCDC61-207ENST00000599044 ELOA3CA0A087WX78 387 aaPredicted RBP16.57■□□□□ 0.24
CCDC61-207ENST00000599044 DEFB1P60022 68 aa16.57■□□□□ 0.24
CCDC61-207ENST00000599044 CYCSP99999 105 aaKnown RBP16.57■□□□□ 0.24
CCDC61-207ENST00000599044 RNF125Q96EQ8 232 aa16.57■□□□□ 0.24
CCDC61-207ENST00000599044 PBDC1Q9BVG4 233 aa16.57■□□□□ 0.24
CCDC61-207ENST00000599044 NRN1Q9NPD7 142 aa16.57■□□□□ 0.24
CCDC61-207ENST00000599044 PAIP2BQ9ULR5 123 aaKnown RBP16.57■□□□□ 0.24
CCDC61-207ENST00000599044 GPX4P36969 197 aaPredicted RBP16.56■□□□□ 0.24
CCDC61-207ENST00000599044 LRRC37A5PQ49AS3 106 aa16.56■□□□□ 0.24
CCDC61-207ENST00000599044 TMEM41BQ5BJD5 291 aa16.56■□□□□ 0.24
CCDC61-207ENST00000599044 ZFP92A6NM28 416 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 H0YIZ8 118 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 MIFP14174 115 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 ATP5IP56385 69 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-207ENST00000599044 TAS2R30P59541 319 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 PRR20EP86478 221 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 PRR20CP86479 221 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 PRR20DP86480 221 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 PRR20BP86481 221 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 PRR20AP86496 221 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 C2CD4CQ8TF44 421 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 PPP1R1CQ8WVI7 109 aa16.55■□□□□ 0.24
CCDC61-207ENST00000599044 STRAPQ9Y3F4 350 aaKnown RBP16.55■□□□□ 0.24
CCDC61-207ENST00000599044 H3BMM0 161 aa16.54■□□□□ 0.24
CCDC61-207ENST00000599044 L7N2F9 121 aa16.54■□□□□ 0.24
CCDC61-207ENST00000599044 CCNKO75909 580 aa16.54■□□□□ 0.24
CCDC61-207ENST00000599044 VAMP2P63027 116 aa16.54■□□□□ 0.24
CCDC61-207ENST00000599044 GDF5OSQ5U4N7 250 aa16.54■□□□□ 0.24
CCDC61-207ENST00000599044 HRH4Q9H3N8 390 aa16.54■□□□□ 0.24
CCDC61-207ENST00000599044 IGKV1OR2-108A0A075B7D4 117 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 TSC22D2O75157 780 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 HLA-DMBP28068 263 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 SNRPD3P62318 126 aaKnown RBP16.53■□□□□ 0.24
CCDC61-207ENST00000599044 RAB11AP62491 216 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 RPP30P78346 268 aaKnown RBP16.53■□□□□ 0.24
CCDC61-207ENST00000599044 OR2F1Q13607 317 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 TMEM14EPQ6UXP3 125 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 SLC35E1Q96K37 410 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 OR5AC2Q9NZP5 309 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 XCL2Q9UBD3 114 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 APLNQ9ULZ1 77 aa16.53■□□□□ 0.24
CCDC61-207ENST00000599044 DNAH6Q9C0G6 4158 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 PMS2P5A8MQ11 134 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 IGLL5B9A064 214 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 PRSS46E5RG02 174 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 Q6ZTC4 211 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 CHAC2Q8WUX2 184 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 RNF126Q9BV68 326 aa16.52■□□□□ 0.24
CCDC61-207ENST00000599044 SEPSECSQ9HD40 501 aaKnown RBP16.52■□□□□ 0.24
CCDC61-207ENST00000599044 CELA1Q9UNI1 258 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms