RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 C1orf194Q5T5A4 169 aa16.78■□□□□ 0.28
IRF3-220ENST00000598108 BPIFCQ8NFQ6 507 aa16.78■□□□□ 0.28
IRF3-220ENST00000598108 NPVFQ9HCQ7 196 aa16.78■□□□□ 0.28
IRF3-220ENST00000598108 NRN1Q9NPD7 142 aa16.78■□□□□ 0.28
IRF3-220ENST00000598108 PFDN2Q9UHV9 154 aa16.78■□□□□ 0.28
IRF3-220ENST00000598108 UBE2CO00762 179 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 GOSR2O14653 212 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 DEDDO75618 318 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 CST7O76096 145 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 NUP62P37198 522 aaPredicted RBP16.77■□□□□ 0.28
IRF3-220ENST00000598108 CAV2P51636 162 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 DEFB135Q30KP9 77 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 Q6ZWC4 215 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 PPP1R14BQ96C90 147 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 CSTL1Q9H114 145 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 MGAT4CQ9UBM8 478 aa16.77■□□□□ 0.28
IRF3-220ENST00000598108 KNCNA6PVL3 124 aa16.76■□□□□ 0.27
IRF3-220ENST00000598108 OR1B1Q8NGR6 318 aa16.76■□□□□ 0.27
IRF3-220ENST00000598108 GGACTQ9BVM4 153 aa16.76■□□□□ 0.27
IRF3-220ENST00000598108 C3orf84H3BNL1 204 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 SPRY2O43597 315 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 SLC38A11Q08AI6 406 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 PSMG4Q5JS54 123 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 OR8I2Q8N0Y5 310 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 DOK5Q9P104 306 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 SLC45A2Q9UMX9 530 aa16.75■□□□□ 0.27
IRF3-220ENST00000598108 KMT2CQ8NEZ4 4911 aaKnown RBP16.74■□□□□ 0.27
IRF3-220ENST00000598108 IGSF23A1L1A6 192 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 ZNF98A6NK75 572 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 PVALBP20472 110 aaPredicted RBP16.74■□□□□ 0.27
IRF3-220ENST00000598108 TEPPQ6URK8 271 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 TMEM252Q8N6L7 170 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 TMEM217Q8N7C4 229 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 RNF183Q96D59 192 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 TMEM147Q9BVK8 224 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 LYRM2Q9NU23 88 aaPredicted RBP16.74■□□□□ 0.27
IRF3-220ENST00000598108 TP53TG1Q9Y2A0 90 aa16.74■□□□□ 0.27
IRF3-220ENST00000598108 LINC00869P0C866 280 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 H2BFSP57053 126 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 PLP1P60201 277 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 STHQ8IWL8 128 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 C17orf77Q96MU5 243 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 SLC25A32Q9H2D1 315 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 SLC25A22Q9H936 323 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 SEPSECSQ9HD40 501 aaKnown RBP16.73■□□□□ 0.27
IRF3-220ENST00000598108 FBXL17Q9UF56 701 aa16.73■□□□□ 0.27
IRF3-220ENST00000598108 HYPMO75409 117 aa16.72■□□□□ 0.27
IRF3-220ENST00000598108 SELENOTP62341 195 aa16.72■□□□□ 0.27
IRF3-220ENST00000598108 ACTL10Q5JWF8 245 aa16.72■□□□□ 0.27
IRF3-220ENST00000598108 TRPT1Q86TN4 253 aaKnown RBP16.72■□□□□ 0.27
IRF3-220ENST00000598108 MGST2Q99735 147 aa16.72■□□□□ 0.27
IRF3-220ENST00000598108 SCRT1Q9BWW7 348 aa16.72■□□□□ 0.27
IRF3-220ENST00000598108 NMES1Q9C002 83 aa16.72■□□□□ 0.27
IRF3-220ENST00000598108 H0YIZ8 118 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 SOCS3O14543 225 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 AGPAT2O15120 278 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 GIG44P09565 113 aaPredicted RBP16.71■□□□□ 0.27
IRF3-220ENST00000598108 LYL1P12980 280 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 SULT1A1P50225 295 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 SNRPD3P62318 126 aaKnown RBP16.71■□□□□ 0.27
IRF3-220ENST00000598108 CASC10Q5T4H9 136 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 PATE2Q6UY27 113 aa16.71■□□□□ 0.27
IRF3-220ENST00000598108 SLC25A39Q9BZJ4 359 aaPredicted RBP16.71■□□□□ 0.27
IRF3-220ENST00000598108 H3BRN7 92 aa16.7■□□□□ 0.26
IRF3-220ENST00000598108 LRRC37A5PQ49AS3 106 aa16.7■□□□□ 0.26
IRF3-220ENST00000598108 ZFAND6Q6FIF0 208 aa16.7■□□□□ 0.26
IRF3-220ENST00000598108 SHANK2-AS3Q9BTD1 123 aa16.7■□□□□ 0.26
IRF3-220ENST00000598108 OR5AC2Q9NZP5 309 aa16.7■□□□□ 0.26
IRF3-220ENST00000598108 HIGD1AQ9Y241 93 aa16.7■□□□□ 0.26
IRF3-220ENST00000598108 SSNA1O43805 119 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 CA1P00915 261 aaPredicted RBP16.69■□□□□ 0.26
IRF3-220ENST00000598108 OR5G3P0C626 314 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 DEFB1P60022 68 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 VWC2Q2TAL6 325 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 UHRF2Q96PU4 802 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 RSG1Q9BU20 258 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 ARL6Q9H0F7 186 aa16.69■□□□□ 0.26
IRF3-220ENST00000598108 S100A11P31949 105 aa16.68■□□□□ 0.26
IRF3-220ENST00000598108 RAP2BP61225 183 aa16.68■□□□□ 0.26
IRF3-220ENST00000598108 ZNF546Q86UE3 836 aa16.68■□□□□ 0.26
IRF3-220ENST00000598108 LINC00052Q96N35 136 aa16.68■□□□□ 0.26
IRF3-220ENST00000598108 UQCC1Q9NVA1 299 aa16.68■□□□□ 0.26
IRF3-220ENST00000598108 WDR83OSQ9Y284 106 aa16.68■□□□□ 0.26
IRF3-220ENST00000598108 GALR1P47211 349 aa16.67■□□□□ 0.26
IRF3-220ENST00000598108 CYCSP99999 105 aaKnown RBP16.67■□□□□ 0.26
IRF3-220ENST00000598108 NHLH2Q02577 135 aa16.67■□□□□ 0.26
IRF3-220ENST00000598108 STX12Q86Y82 276 aa16.67■□□□□ 0.26
IRF3-220ENST00000598108 AGRNO00468 2067 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 H3BMM0 161 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 RLN2P04090 185 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 PSMB3P49720 205 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 PPP1R1CQ8WVI7 109 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 C20orf173Q96LM9 149 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 RNF126Q9BV68 326 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 ARV1Q9H2C2 271 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 STARD9Q9P2P6 4700 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 ALG5Q9Y673 324 aa16.66■□□□□ 0.26
IRF3-220ENST00000598108 A0A0J9YWU9 116 aa16.65■□□□□ 0.26
IRF3-220ENST00000598108 E5RGE8 158 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms