RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 FABP1P07148 127 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 MIFP14174 115 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 NKX2-1P43699 371 aaPredicted RBP9.44□□□□□ -0.9
LIG1-212ENST00000596549 PAX9P55771 341 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 C1orf194Q5T5A4 169 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 MFFQ9GZY8 342 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 C20orf85Q9H1P6 137 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 SLC25A32Q9H2D1 315 aa9.44□□□□□ -0.9
LIG1-212ENST00000596549 STRAPQ9Y3F4 350 aaKnown RBP9.44□□□□□ -0.9
LIG1-212ENST00000596549 ELOA3CA0A087WX78 387 aaPredicted RBP9.43□□□□□ -0.9
LIG1-212ENST00000596549 SNRPGP15A8MWD9 76 aa9.43□□□□□ -0.9
LIG1-212ENST00000596549 PSMB3P49720 205 aa9.43□□□□□ -0.9
LIG1-212ENST00000596549 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
LIG1-212ENST00000596549 AKR1C1Q04828 323 aa9.43□□□□□ -0.9
LIG1-212ENST00000596549 C4orf46Q504U0 113 aa9.43□□□□□ -0.9
LIG1-212ENST00000596549 SAV1Q9H4B6 383 aaPredicted RBP9.43□□□□□ -0.9
LIG1-212ENST00000596549 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
LIG1-212ENST00000596549 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
LIG1-212ENST00000596549 RCL1Q9Y2P8 373 aaKnown RBP9.43□□□□□ -0.9
LIG1-212ENST00000596549 SCGB1D2O95969 90 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 TMEM14EPQ6UXP3 125 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 ZNF709Q8N972 641 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 ZBTB8BQ8NAP8 495 aaPredicted RBP9.42□□□□□ -0.9
LIG1-212ENST00000596549 MITD1Q8WV92 249 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 PPP1R14BQ96C90 147 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 HRH4Q9H3N8 390 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 SLC25A22Q9H936 323 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 TBC1D24Q9ULP9 559 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 SLC45A2Q9UMX9 530 aa9.42□□□□□ -0.9
LIG1-212ENST00000596549 ZNF98A6NK75 572 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 CENPXA8MT69 81 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 F6UB75 175 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 H3BRN7 92 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 CCSO14618 274 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 LYRM1O43325 122 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 IFNA21P01568 189 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 FXYD7P58549 80 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 IAH1Q2TAA2 248 aaPredicted RBP9.41□□□□□ -0.9
LIG1-212ENST00000596549 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 Q6ZTC4 211 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 TMEM144Q7Z5S9 345 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 OR8I2Q8N0Y5 310 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 BPIFCQ8NFQ6 507 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 SMIM8Q96KF7 97 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 LINC00052Q96N35 136 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 SCRT1Q9BWW7 348 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 PFDN2Q9UHV9 154 aa9.41□□□□□ -0.9
LIG1-212ENST00000596549 SMCO3A2RU48 225 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 ISLRO14498 428 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 DEDDO75618 318 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
LIG1-212ENST00000596549 ORM2P19652 201 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 RRAS2P62070 204 aaPredicted RBP9.4□□□□□ -0.9
LIG1-212ENST00000596549 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 ZNF705AQ6ZN79 300 aaPredicted RBP9.4□□□□□ -0.9
LIG1-212ENST00000596549 CYP2G1PQ6ZSU1 146 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 RPP25LQ8N5L8 163 aaKnown RBP9.4□□□□□ -0.9
LIG1-212ENST00000596549 OR1B1Q8NGR6 318 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 C1QTNF4Q9BXJ3 329 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 SLC35B3Q9H1N7 401 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 DOK5Q9P104 306 aa9.4□□□□□ -0.9
LIG1-212ENST00000596549 KMT2AQ03164 3969 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 ZNF705FA8MVS1 300 aaPredicted RBP9.39□□□□□ -0.91
LIG1-212ENST00000596549 TSC22D2O75157 780 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 MBPP02686 304 aaPredicted RBP9.39□□□□□ -0.91
LIG1-212ENST00000596549 TCRBP04435 133 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
LIG1-212ENST00000596549 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
LIG1-212ENST00000596549 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 ID1P41134 155 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 NUTF2P61970 127 aaKnown RBP9.39□□□□□ -0.91
LIG1-212ENST00000596549 DLK1P80370 383 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 ARL16Q0P5N6 197 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 LGALS9CQ6DKI2 356 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 C2CD4CQ8TF44 421 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 CLUHP3Q96NS8 147 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 NDUFA13Q9P0J0 144 aa9.39□□□□□ -0.91
LIG1-212ENST00000596549 TRAV6A0A075B6T7 132 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 TRAV8-2A0A0B4J237 113 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 A0A0J9YX75 114 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 A8MTW9 85 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 LINC00869P0C866 280 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 GALR1P47211 349 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 MEOX2P50222 304 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 PLP1P60201 277 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 SLC38A11Q08AI6 406 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 CNPY1Q3B7I2 92 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 ZNF767PQ75MW2 155 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
LIG1-212ENST00000596549 C11orf1Q9H5F2 150 aa9.38□□□□□ -0.91
LIG1-212ENST00000596549 NUDT15Q9NV35 164 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms