RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 SULT1A3P0DMM9 295 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 SULT1A4P0DMN0 295 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 LYZP61626 148 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 GAMTQ14353 236 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 SURF2Q15527 256 aaPredicted RBP6.99□□□□□ -1.29
LIG1-209ENST00000596104 LGI3Q8N145 548 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 DTD1Q8TEA8 209 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 IL22RA2Q969J5 263 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 ATG101Q9BSB4 218 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 MAGT1Q9H0U3 335 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 VCX3AQ9NNX9 186 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 DOK5Q9P104 306 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 HSPB7Q9UBY9 170 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 CACFD1Q9UGQ2 172 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 GPR132Q9UNW8 380 aa6.99□□□□□ -1.29
LIG1-209ENST00000596104 PLAC8L1A1L4L8 177 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 LYRM9A8MSI8 78 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 ZNF705GA8MUZ8 300 aaPredicted RBP6.98□□□□□ -1.29
LIG1-209ENST00000596104 GPX4P36969 197 aaPredicted RBP6.98□□□□□ -1.29
LIG1-209ENST00000596104 OR2F1Q13607 317 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 SAMD13Q5VXD3 122 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 MZT2AQ6P582 158 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 OR8I2Q8N0Y5 310 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 RBKSQ9H477 322 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 RPRMQ9NS64 109 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 PRR13Q9NZ81 148 aa6.98□□□□□ -1.29
LIG1-209ENST00000596104 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 SNRPGP15A8MWD9 76 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 GABARAPH6UMI1 98 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 GABARAPO95166 117 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
LIG1-209ENST00000596104 TSPOP30536 169 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 MEOX2P50222 304 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 CCR6P51684 374 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 ATP5IP56385 69 aaPredicted RBP6.97□□□□□ -1.29
LIG1-209ENST00000596104 SSBP1Q04837 148 aaKnown RBP6.97□□□□□ -1.29
LIG1-209ENST00000596104 OR11H7Q8NGC8 314 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 C15orf40Q8WUR7 153 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 AP3S1Q92572 193 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 SLC35E1Q96K37 410 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 C16orf92Q96LL3 132 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 TRGV9Q99603 122 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 TMEM208Q9BTX3 173 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 SLC25A32Q9H2D1 315 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 MIXL1Q9H2W2 232 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 LINC00588Q9Y4M8 146 aa6.97□□□□□ -1.29
LIG1-209ENST00000596104 DNAH5Q8TE73 4624 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 A0A0B4J2A0 478 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 DISC1C4P0D8 188 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 F5H768 121 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 M0R2Z0 102 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 NUDT3O95989 172 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 FABP1P07148 127 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 DEFB130BP0DP73 79 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 DEFB130AP0DP74 79 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 ZNF182P17025 639 aaPredicted RBP6.96□□□□□ -1.3
LIG1-209ENST00000596104 AZU1P20160 251 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 CNN1P51911 297 aaKnown RBP6.96□□□□□ -1.3
LIG1-209ENST00000596104 SMCO1Q147U7 214 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 SPINK13Q1W4C9 94 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 LYZL2Q7Z4W2 148 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 THAP8Q8NA92 274 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 OR4C16Q8NGL9 310 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 RNF141Q8WVD5 230 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 PPP1R14BQ96C90 147 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 NAA50Q9GZZ1 169 aaKnown RBP6.96□□□□□ -1.3
LIG1-209ENST00000596104 SCRT2Q9NQ03 307 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 SHPKQ9UHJ6 478 aa6.96□□□□□ -1.3
LIG1-209ENST00000596104 TRAV8-2A0A0B4J237 113 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 ZNF98A6NK75 572 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 DUSP14O95147 198 aaKnown RBP6.95□□□□□ -1.3
LIG1-209ENST00000596104 INSP01308 110 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 ATP5G1P05496 136 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 GALR1P47211 349 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 ATP5G3P48201 142 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 CCL18P55774 89 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 B2MP61769 119 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 MRPS10P82664 201 aaKnown RBP6.95□□□□□ -1.3
LIG1-209ENST00000596104 FCN2Q15485 313 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 CTF1Q16619 201 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 BAP18Q8IXM2 172 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 OR51S1Q8NGJ8 323 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 SMIM4Q8WVI0 70 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 RSG1Q9BU20 258 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 SLC45A2Q9UMX9 530 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 KCNIP3Q9Y2W7 256 aa6.95□□□□□ -1.3
LIG1-209ENST00000596104 CBY3A6NI87 242 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 PITX3O75364 302 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 CFDP00746 253 aaPredicted RBP6.94□□□□□ -1.3
LIG1-209ENST00000596104 AKAIN1P0CW23 69 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 IGFL4Q6B9Z1 124 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 SSX7Q7RTT5 188 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 OR4D5Q8NGN0 318 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 PRRT1Q99946 306 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 SLC25A22Q9H936 323 aa6.94□□□□□ -1.3
LIG1-209ENST00000596104 TRAV12-2A0A075B6T6 113 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms