RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MORN5Q5VZ52 161 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 SFT2D1Q8WV19 159 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 C4orf3Q8WVX3 66 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 HRH4Q9H3N8 390 aa11.32□□□□□ -0.6
SHKBP1-211ENST00000595945 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 LINC00305Q7Z4B0 112 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 UHRF2Q96PU4 802 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 PBDC1Q9BVG4 233 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 SLC25A2Q9BXI2 301 aa11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 TECRQ9NZ01 308 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-211ENST00000595945 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 A0A087WW49 117 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 TRAV5A0A0B4J249 113 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 HSPB1P04792 205 aaKnown RBP11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 C8orf88P0DMB2 117 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 KRTAP10-3P60369 221 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 PMS2P11Q13670 270 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 NDUFA5Q16718 116 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 IL34Q6ZMJ4 242 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 TMEM190Q8WZ59 177 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 U3KQE9 123 aa11.3□□□□□ -0.6
SHKBP1-211ENST00000595945 NUDT19A8MXV4 375 aa11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 HAX1O00165 279 aa11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 TAS2R45P59539 299 aa11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 UNQ9165/PRO28630Q6UXU0 137 aa11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 SUN5Q8TC36 379 aa11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 CITED2Q99967 270 aaPredicted RBP11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 RABAC1Q9UI14 185 aa11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
SHKBP1-211ENST00000595945 A0A1B0GV50 99 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 TEX46H3BTG2 121 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 CXorf1O96002 111 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 FOXL1Q12952 345 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 KHDC3LQ587J8 217 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 MARC2Q969Z3 335 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 PFDN2Q9UHV9 154 aa11.28□□□□□ -0.6
SHKBP1-211ENST00000595945 RAB19A4D1S5 217 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 CRYBB3P26998 211 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 GCHFRP30047 84 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 FAM106AQ4KMX7 169 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 HIST2H2BDQ6DRA6 164 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 REC114Q7Z4M0 266 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 C11orf44Q8N8P7 122 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 TMEM14CQ9P0S9 112 aa11.27□□□□□ -0.61
SHKBP1-211ENST00000595945 IGHV3OR16-8A0A075B7F1 116 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 LINC01619G3V211 115 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 K7EMT4 169 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 LGALS9O00182 355 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 GP9P14770 177 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 ZP3P21754 424 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 S100A7P31151 101 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 PSMB3P49720 205 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 RPEL1Q2QD12 228 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 KHDC1LQ5JSQ8 128 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 PRIMA1Q86XR5 153 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 SLC7A5P1Q8MH63 180 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 EIF4E3Q8N5X7 224 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 METTL26Q96S19 204 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 PAXXQ9BUH6 204 aa11.26□□□□□ -0.61
SHKBP1-211ENST00000595945 A8MWP6 167 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 BUB3O43684 328 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 PPT1P50897 306 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 FHL3Q13643 280 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 C8orf86Q6ZUL3 223 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 FXYD5Q96DB9 178 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 OR51M1Q9H341 326 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 RNF24Q9Y225 148 aa11.25□□□□□ -0.61
SHKBP1-211ENST00000595945 STAB1Q9NY15 2570 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 LOC102723971A0A1B0GUV8 181 aa11.24□□□□□ -0.61
SHKBP1-211ENST00000595945 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms