RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 NRN1Q9NPD7 142 aa8.07□□□□□ -1.12
SHKBP1-206ENST00000595523 KNCNA6PVL3 124 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 INMT-MINDY4F8WBC2 141 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 SOCS3O14543 225 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 SIX6O95475 246 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 NUP62P37198 522 aaPredicted RBP8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 AP2S1P53680 142 aaPredicted RBP8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 RAB32Q13637 225 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 C1orf194Q5T5A4 169 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 CYP2G1PQ6ZSU1 146 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 BPIFCQ8NFQ6 507 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 OR10P1Q8NGE3 313 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 RNF183Q96D59 192 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 TP53TG1Q9Y2A0 90 aa8.06□□□□□ -1.12
SHKBP1-206ENST00000595523 FAM24AA6NFZ4 105 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 L7N2F9 121 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 GOSR2O14653 212 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 SPRY2O43597 315 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 PRAF2O60831 178 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 DEDDO75618 318 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 CFDP00746 253 aaPredicted RBP8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 GIG44P09565 113 aaPredicted RBP8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 ORM2P19652 201 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 S100A10P60903 97 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 VAMP2P63027 116 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 SLC38A11Q08AI6 406 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 PSMG4Q5JS54 123 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 TRPT1Q86TN4 253 aaKnown RBP8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 CSTL1Q9H114 145 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 SLC25A32Q9H2D1 315 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 GPN1Q9HCN4 374 aaPredicted RBP8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 NPVFQ9HCQ7 196 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 LYRM2Q9NU23 88 aaPredicted RBP8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 SLC45A2Q9UMX9 530 aa8.05□□□□□ -1.12
SHKBP1-206ENST00000595523 IGSF23A1L1A6 192 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 ZNF98A6NK75 572 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 CST7O76096 145 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 LYL1P12980 280 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 CAV2P51636 162 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 DEFA1P59665 94 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 DEFA3P59666 94 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 DEFB1P60022 68 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 PLP1P60201 277 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 TEPPQ6URK8 271 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 OR8I2Q8N0Y5 310 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 OR1B1Q8NGR6 318 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 PPP1R14BQ96C90 147 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 GGACTQ9BVM4 153 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 SCRT1Q9BWW7 348 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 SEPSECSQ9HD40 501 aaKnown RBP8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 DOK5Q9P104 306 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 MGAT4CQ9UBM8 478 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 FBXL17Q9UF56 701 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 PFDN2Q9UHV9 154 aa8.04□□□□□ -1.12
SHKBP1-206ENST00000595523 H3BRN7 92 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 AGPAT2O15120 278 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 LINC00869P0C866 280 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 C4BPBP20851 252 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 BCAP31P51572 246 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 H2BFSP57053 126 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 SELENOTP62341 195 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 VWC2Q2TAL6 325 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 ACTL10Q5JWF8 245 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 GDF5OSQ5U4N7 250 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 PATE2Q6UY27 113 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 STHQ8IWL8 128 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 TMEM252Q8N6L7 170 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 TMEM217Q8N7C4 229 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 UHRF2Q96PU4 802 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 MGST2Q99735 147 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 SHANK2-AS3Q9BTD1 123 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 TMEM147Q9BVK8 224 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 SLC25A39Q9BZJ4 359 aaPredicted RBP8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 SLC25A22Q9H936 323 aa8.03□□□□□ -1.12
SHKBP1-206ENST00000595523 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 H0YIZ8 118 aa8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 CA1P00915 261 aaPredicted RBP8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 PVALBP20472 110 aaPredicted RBP8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 SULT1A1P50225 295 aa8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 SNRPD3P62318 126 aaKnown RBP8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 NMES1Q9C002 83 aa8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 OR5AC2Q9NZP5 309 aa8.02□□□□□ -1.13
SHKBP1-206ENST00000595523 H3BMM0 161 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 HYPMO75409 117 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 OR5G3P0C626 314 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 HLA-DRB4P13762 266 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 PSMB3P49720 205 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 ZNF546Q86UE3 836 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 GATAD1Q8WUU5 269 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 C20orf173Q96LM9 149 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 RSG1Q9BU20 258 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 ARL6Q9H0F7 186 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 HLA-DRB4X5D2U9 266 aa8.01□□□□□ -1.13
SHKBP1-206ENST00000595523 TRAV8-2A0A0B4J237 113 aa8□□□□□ -1.13
SHKBP1-206ENST00000595523 UBE2L5PA0A1B0GUS4 154 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 358.6 ms