RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FTH1P19P0C7X4 201 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 LOXP28300 417 aaPredicted RBP10.57□□□□□ -0.72
VRK3-209ENST00000594948 RHOGP84095 191 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 C12orf54Q6X4T0 127 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 C22orf34Q6ZV56 151 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 FAM57AQ8TBR7 257 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 RPH3ALQ9UNE2 315 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 RNF24Q9Y225 148 aa10.57□□□□□ -0.72
VRK3-209ENST00000594948 F11RQ9Y624 299 aaKnown RBP10.57□□□□□ -0.72
VRK3-209ENST00000594948 SH2D7A6NKC9 451 aaPredicted RBP10.56□□□□□ -0.72
VRK3-209ENST00000594948 FAM87AP0C7U9 286 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 IGHV1-8P0DP01 117 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 COL8A1P27658 744 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 RIGQ13278 110 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 PMCHL2Q9BQD1 86 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
VRK3-209ENST00000594948 SCRT2Q9NQ03 307 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 RUSC1-AS1Q66K80 236 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 Q6AWC8 147 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 HCP5Q6MZN7 132 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 SGK494Q96LW2 274 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 TMEM133Q9H2Q1 129 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 GSX1Q9H4S2 264 aaPredicted RBP10.56□□□□□ -0.72
VRK3-209ENST00000594948 ZNF835Q9Y2P0 537 aa10.56□□□□□ -0.72
VRK3-209ENST00000594948 PLCE1Q9P212 2302 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 LOC105371242A0A075B767 164 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 OVOL3O00110 214 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 IGLV2-11P01706 119 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 CDKN1BP46527 198 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 PCP4P48539 62 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 RBX1P62877 108 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 RBPJQ06330 500 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 LYPD2Q6UXB3 125 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 LYPD1Q8N2G4 141 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 RITA1Q96K30 269 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 CTSZQ9UBR2 303 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 SIGLEC9Q9Y336 463 aa10.55□□□□□ -0.72
VRK3-209ENST00000594948 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 VSTM5A8MXK1 200 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 C16orf97H3BN30 126 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 IGLC1P0CG04 106 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 BVES-AS1Q5T3Y7 98 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 LINC00173Q6ZV60 143 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 RNASE8Q8TDE3 154 aaKnown RBP10.54□□□□□ -0.72
VRK3-209ENST00000594948 SLC25A39Q9BZJ4 359 aaPredicted RBP10.54□□□□□ -0.72
VRK3-209ENST00000594948 VPS13AQ96RL7 3174 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 hDV102S1A0JD36 115 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 TEX22C9J3V5 150 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 M0QZ24 198 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 ENSAO43768 121 aaKnown RBP10.54□□□□□ -0.72
VRK3-209ENST00000594948 HIST1H1AQ02539 215 aaPredicted RBP10.54□□□□□ -0.72
VRK3-209ENST00000594948 MPV17L2Q567V2 206 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 OR4C5Q8NGB2 326 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 DPF1Q92782 380 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 RNF5Q99942 180 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
VRK3-209ENST00000594948 FRYQ5TBA9 3013 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 TAX1BP3O14907 124 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 PSG1P11464 419 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 HTR1DP28221 377 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 Q6ZVH6 145 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 CIARTQ8N365 385 aaPredicted RBP10.53□□□□□ -0.72
VRK3-209ENST00000594948 DEFB124Q8NES8 71 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 SCNM1Q9BWG6 230 aa10.53□□□□□ -0.72
VRK3-209ENST00000594948 CUL9Q8IWT3 2517 aa10.52□□□□□ -0.72
VRK3-209ENST00000594948 I3L2K1 104 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 K7EQM0 130 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 CD5LO43866 347 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 LYZP61626 148 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 GOLT1AQ6ZVE7 132 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 PRNTQ86SH4 94 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 PPP1R27Q86WC6 154 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 NEU4Q8WWR8 484 aaPredicted RBP10.52□□□□□ -0.73
VRK3-209ENST00000594948 TMUB1Q9BVT8 246 aa10.52□□□□□ -0.73
VRK3-209ENST00000594948 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 H3BRN7 92 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 NUDT3O95989 172 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 VAMP3Q15836 100 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 WFDC8Q8IUA0 241 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 CCL17Q92583 94 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 SHANK2-AS3Q9BTD1 123 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 NGBQ9NPG2 151 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 DMDP11532 3685 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 ICE1Q9Y2F5 2266 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 ARFGEF3Q5TH69 2177 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 SPAARA0A1B0GVQ0 90 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 ZNF785A8K8V0 405 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 K7EM74 188 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 RBP4P02753 201 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 COX8AP10176 69 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 CD24P25063 80 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 CSN1S1P47710 185 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 BSPH1Q075Z2 132 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 ZNF493Q6ZR52 646 aa10.51□□□□□ -0.73
VRK3-209ENST00000594948 BPIFA4PQ86YQ2 179 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms