RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ASAH1Q13510 395 aa13.01□□□□□ -0.33
SHKBP1-204ENST00000594862 OR8I2Q8N0Y5 310 aa13.01□□□□□ -0.33
SHKBP1-204ENST00000594862 GPR82Q96P67 336 aa13.01□□□□□ -0.33
SHKBP1-204ENST00000594862 C11orf68Q9H3H3 251 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-204ENST00000594862 GSKIPQ9P0R6 139 aa13.01□□□□□ -0.33
SHKBP1-204ENST00000594862 MGAT4CQ9UBM8 478 aa13.01□□□□□ -0.33
SHKBP1-204ENST00000594862 SMCO3A2RU48 225 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 NUPR2A6NF83 97 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 H2AFB2P0C5Z0 115 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 PSMB3P49720 205 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 ACTL10Q5JWF8 245 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 TMEM14EPQ6UXP3 125 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 OR10P1Q8NGE3 313 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 OR11H2Q8NH07 326 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 RNF24Q9Y225 148 aa13□□□□□ -0.33
SHKBP1-204ENST00000594862 CXorf65A6NEN9 183 aa12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 A6NHS1 94 aa12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 L7N2F9 121 aa12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 GALR1P47211 349 aa12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 VAMP2P63027 116 aa12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 GGACTQ9BVM4 153 aa12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 RCL1Q9Y2P8 373 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-204ENST00000594862 KNCNA6PVL3 124 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 ISLRO14498 428 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 IL5P05113 134 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 PAX9P55771 341 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 SPATA31B1PQ5VZV4 182 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 C12orf45Q8N5I9 185 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 ENKURQ8TC29 256 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 MFFQ9GZY8 342 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 NPVFQ9HCQ7 196 aa12.98□□□□□ -0.33
SHKBP1-204ENST00000594862 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 C5orf51A6NDU8 294 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 PMS2P5A8MQ11 134 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 K7EPK0 472 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 MBPP02686 304 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 METTL15P1P0C7V9 234 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 PVALBP20472 110 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 RAP2BP61225 183 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 CYP2G1PQ6ZSU1 146 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 OR1B1Q8NGR6 318 aa12.97□□□□□ -0.33
SHKBP1-204ENST00000594862 UPK1BO75841 260 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 HLA-DRB4P13762 266 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 ORM2P19652 201 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 PXDC1Q5TGL8 231 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 TEPPQ6URK8 271 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 C2orf50Q96LR7 162 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 SEC22CQ9BRL7 303 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 BATF3Q9NR55 127 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 TBC1D24Q9ULP9 559 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.33
SHKBP1-204ENST00000594862 C7orf66A4D0T2 115 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 ZNF98A6NK75 572 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 CCSO14618 274 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 MIFP14174 115 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 PLP1P60201 277 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 ZNF546Q86UE3 836 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 SLC25A22Q9H936 323 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 HIGD1AQ9Y241 93 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 KLK5Q9Y337 293 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 DNAH1Q9P2D7 4330 aa12.95□□□□□ -0.34
SHKBP1-204ENST00000594862 H3BMM0 161 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 SOCS3O14543 225 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 HYPMO75409 117 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 DEDDO75618 318 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 LINC00869P0C866 280 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 C4BPBP20851 252 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 RRAS2P62070 204 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 PMS2P11Q13670 270 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 LINC00052Q96N35 136 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 SLC25A32Q9H2D1 315 aa12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 LSM5Q9Y4Y9 91 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-204ENST00000594862 PRAF2O60831 178 aa12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 RPL7P18124 248 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 BCAP31P51572 246 aa12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 CEMP1Q6PRD7 247 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 C11orf45Q8TAV5 145 aa12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 C16orf92Q96LL3 132 aa12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 SHANK2-AS3Q9BTD1 123 aa12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 SAV1Q9H4B6 383 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 RPRMQ9NS64 109 aa12.93□□□□□ -0.34
SHKBP1-204ENST00000594862 STARD9Q9P2P6 4700 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 ZNF705EA8MWA4 302 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 H3BRN7 92 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 GATA2P23769 480 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 CAV2P51636 162 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 DEFA1P59665 94 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 DEFA3P59666 94 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 RAB31Q13636 194 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 EBLN2Q6P2I7 272 aa12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 SLC25A39Q9BZJ4 359 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-204ENST00000594862 GOSR2O14653 212 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms