RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 MEDAGQ5VYS4 303 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 LINC00173Q6ZV60 143 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 IFT20Q8IY31 132 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 SPAG16Q8N0X2 631 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 ARRDC1Q8N5I2 433 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 FER1L6-AS1Q8NA97 138 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 ZNF738Q8NE65 137 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 OR51G1Q8NGK1 321 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 PRSS3P2Q8NHM4 247 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 DIRC1Q969H9 104 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 SLC25A38Q96DW6 304 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 LINC00477Q96M19 166 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 TMEM56Q96MV1 263 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 DERL3Q96Q80 235 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 HSD17B10Q99714 261 aaKnown RBP1.74□□□□□ -2.13
VRK3-204ENST00000593912 CMSS1Q9BQ75 279 aaKnown RBP1.74□□□□□ -2.13
VRK3-204ENST00000593912 MLST8Q9BVC4 326 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 PBDC1Q9BVG4 233 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 C12orf4Q9NQ89 552 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 TP53TG3Q9ULZ0 132 aa1.74□□□□□ -2.13
VRK3-204ENST00000593912 A0A096LNI7 61 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 TRBV5-5A0A0J9YX44 114 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 TMEM212A6NML5 194 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 BBIP1A8MTZ0 92 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 RGS16O15492 202 aaPredicted RBP1.73□□□□□ -2.13
VRK3-204ENST00000593912 GSTZ1O43708 216 aaPredicted RBP1.73□□□□□ -2.13
VRK3-204ENST00000593912 TCRBP04435 133 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 FGF2P09038 288 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 IGLC1P0CG04 106 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 PRKACGP22612 351 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 DCKP27707 260 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 ATP6V1E1P36543 226 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 GTF2A1P52655 376 aaPredicted RBP1.73□□□□□ -2.13
VRK3-204ENST00000593912 ZNF138P52744 262 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 TCL1AP56279 114 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 TAS2R31P59538 309 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 VSNL1P62760 191 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 ZIK1Q3SY52 487 aaPredicted RBP1.73□□□□□ -2.13
VRK3-204ENST00000593912 OR2T5Q6IEZ7 315 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 PRR27Q6MZM9 219 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 ATRAIDQ6UW56 229 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 TBC1D26Q86UD7 250 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 CCDC190Q86UF4 302 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 LINC00337Q8N6G1 96 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 BPIFB6Q8NFQ5 453 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 OR8A1Q8NGG7 326 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 OR2T29Q8NH02 315 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 OR4X1Q8NH49 305 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 SUN5Q8TC36 379 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 GIPC3Q8TF64 312 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 Q8WTZ3 238 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 ARHGAP5-AS1Q96IT6 56 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 C2orf50Q96LR7 162 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 OPRPNQ99935 248 aaPredicted RBP1.73□□□□□ -2.13
VRK3-204ENST00000593912 C1orf43Q9BWL3 253 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 TMEM59Q9BXS4 323 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 PECRQ9BY49 303 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 CCL28Q9NRJ3 127 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 WARS2Q9UGM6 360 aaKnown RBP1.73□□□□□ -2.13
VRK3-204ENST00000593912 KCNK7Q9Y2U2 307 aa1.73□□□□□ -2.13
VRK3-204ENST00000593912 IGHV1OR15-1A0A075B7D0 117 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 LINC00854A0A1B0GVQ3 168 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 hDV102S1A0JD36 115 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 DAPL1A0PJW8 107 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 HPRT1P00492 218 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 HLA-DQB1P01920 261 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 MT-ND6P03923 174 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 CD2P06729 351 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 FCGR3AP08637 254 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 OR10J1P30954 320 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 HRH1P35367 487 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 G6PCP35575 357 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 OPRK1P41145 380 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 RND2P52198 227 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 TMEM50BP56557 158 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 SUPT4H1P63272 117 aaKnown RBP1.72□□□□□ -2.13
VRK3-204ENST00000593912 EFNB1P98172 346 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 CYCSP99999 105 aaKnown RBP1.72□□□□□ -2.13
VRK3-204ENST00000593912 ST3GAL4Q11206 333 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 KRTAP13-3Q3SY46 172 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 SAMD13Q5VXD3 122 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 XAF1Q6GPH4 301 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 ENHOQ6UWT2 76 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 COX6B2Q6YFQ2 88 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 SH2D6Q7Z4S9 175 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 ARPINQ7Z6K5 226 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 LHFPL3Q86UP9 236 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 NIT1Q86X76 327 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 GID4Q8IVV7 300 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 CDH26Q8IXH8 852 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 IQCF2Q8IXL9 164 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 ARL6IP6Q8N6S5 226 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 OR51H1Q8NH63 302 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 MARCH1Q8TCQ1 289 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 SEC22AQ96IW7 307 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 PGLYRP3Q96LB9 341 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 NSMCE2Q96MF7 247 aa1.72□□□□□ -2.13
VRK3-204ENST00000593912 C20orf144Q9BQM9 153 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms