RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CNPY1Q3B7I2 92 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 Q8WTZ3 238 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 C1QTNF4Q9BXJ3 329 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 MAGT1Q9H0U3 335 aa10.63□□□□□ -0.71
PNKP-202ENST00000593706 NACAE9PAV3 2078 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 HNRNPCP07910 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
PNKP-202ENST00000593706 AP2S1P53680 142 aaPredicted RBP10.62□□□□□ -0.71
PNKP-202ENST00000593706 NUTF2P61970 127 aaKnown RBP10.62□□□□□ -0.71
PNKP-202ENST00000593706 SNRPD3P62318 126 aaKnown RBP10.62□□□□□ -0.71
PNKP-202ENST00000593706 LINC00299Q6ZSB3 139 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 CSNK1G2-AS1Q8NCQ2 148 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 OR4D5Q8NGN0 318 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 CIB3Q96Q77 187 aaPredicted RBP10.62□□□□□ -0.71
PNKP-202ENST00000593706 RAB40CQ96S21 281 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 NDUFAF3Q9BU61 184 aa10.62□□□□□ -0.71
PNKP-202ENST00000593706 CENPXA8MT69 81 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 BUB3O43684 328 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 MED6O75586 246 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 ZNF90Q03938 601 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 COQ8AQ8NI60 647 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 MITD1Q8WV92 249 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 C20orf85Q9H1P6 137 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 XCL2Q9UBD3 114 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 DNAH11Q96DT5 4516 aa10.61□□□□□ -0.71
PNKP-202ENST00000593706 DYNC1H1Q14204 4646 aaKnown RBP10.61□□□□□ -0.71
PNKP-202ENST00000593706 PRSS29PA6NIE9 313 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 LYRM1O43325 122 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 OR8G2PQ6IF36 304 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 POM121L12Q8N7R1 296 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 OR51G1Q8NGK1 321 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 SLC35E1Q96K37 410 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 TRGV9Q99603 122 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 CCDC32Q9BV29 185 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 NRN1Q9NPD7 142 aa10.6□□□□□ -0.71
PNKP-202ENST00000593706 ZFP92A6NM28 416 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 M0R2N4 97 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 WRBO00258 174 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
PNKP-202ENST00000593706 RAB11AP62491 216 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 C4orf46Q504U0 113 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 SIGLEC15Q6ZMC9 328 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 UBE2DNLQ8IWF7 75 aa10.59□□□□□ -0.71
PNKP-202ENST00000593706 A0A1B0GVY2 172 aa10.58□□□□□ -0.72
PNKP-202ENST00000593706 PMS2P5A8MQ11 134 aa10.58□□□□□ -0.72
PNKP-202ENST00000593706 H3BP45 60 aa10.58□□□□□ -0.72
PNKP-202ENST00000593706 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
PNKP-202ENST00000593706 PAX9P55771 341 aa10.58□□□□□ -0.72
PNKP-202ENST00000593706 SCRT1Q9BWW7 348 aa10.58□□□□□ -0.72
PNKP-202ENST00000593706 TCRBP04435 133 aa10.57□□□□□ -0.72
PNKP-202ENST00000593706 NKX2-1P43699 371 aaPredicted RBP10.57□□□□□ -0.72
PNKP-202ENST00000593706 EMP1P54849 157 aa10.57□□□□□ -0.72
PNKP-202ENST00000593706 RPP30P78346 268 aaKnown RBP10.57□□□□□ -0.72
PNKP-202ENST00000593706 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
PNKP-202ENST00000593706 ACOT7LQ6ZUV0 252 aa10.57□□□□□ -0.72
PNKP-202ENST00000593706 RCL1Q9Y2P8 373 aaKnown RBP10.57□□□□□ -0.72
PNKP-202ENST00000593706 STRAPQ9Y3F4 350 aaKnown RBP10.57□□□□□ -0.72
PNKP-202ENST00000593706 ABCA13Q86UQ4 5058 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 IGHV3OR16-12A0A075B7B8 117 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 H3BMM0 161 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 SSSCA1O60232 199 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 IFNA21P01568 189 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 IGKV3-20P01619 116 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 SPART-AS1P0CW21 52 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 HLA-DRB4P13762 266 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 NUP62P37198 522 aaPredicted RBP10.56□□□□□ -0.72
PNKP-202ENST00000593706 IAH1Q2TAA2 248 aaPredicted RBP10.56□□□□□ -0.72
PNKP-202ENST00000593706 TMEM14EPQ6UXP3 125 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 ZBTB8BQ8NAP8 495 aaPredicted RBP10.56□□□□□ -0.72
PNKP-202ENST00000593706 SMIM8Q96KF7 97 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 SEPSECSQ9HD40 501 aaKnown RBP10.56□□□□□ -0.72
PNKP-202ENST00000593706 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
PNKP-202ENST00000593706 TMEM189A5PLL7 270 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 SOCS3O14543 225 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 RTL8CO15255 209 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 CCNKO75909 580 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 FABP1P07148 127 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 LYZP61626 148 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 OR2F1Q13607 317 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 TMEM182Q6ZP80 229 aaPredicted RBP10.55□□□□□ -0.72
PNKP-202ENST00000593706 C17orf77Q96MU5 243 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 PTTG2Q9NZH5 202 aa10.55□□□□□ -0.72
PNKP-202ENST00000593706 PAIP2BQ9ULR5 123 aaKnown RBP10.55□□□□□ -0.72
PNKP-202ENST00000593706 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
PNKP-202ENST00000593706 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
PNKP-202ENST00000593706 MBPP02686 304 aaPredicted RBP10.54□□□□□ -0.72
PNKP-202ENST00000593706 FXYD7P58549 80 aa10.54□□□□□ -0.72
PNKP-202ENST00000593706 TAS2R30P59541 319 aa10.54□□□□□ -0.72
PNKP-202ENST00000593706 ASAH1Q13510 395 aa10.54□□□□□ -0.72
PNKP-202ENST00000593706 ZNF705AQ6ZN79 300 aaPredicted RBP10.54□□□□□ -0.72
PNKP-202ENST00000593706 ZNF431Q8TF32 576 aaPredicted RBP10.54□□□□□ -0.72
PNKP-202ENST00000593706 SEC22CQ9BRL7 303 aa10.54□□□□□ -0.72
PNKP-202ENST00000593706 WDR12Q9GZL7 423 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms