RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ASH1LQ9NR48 2969 aaKnown RBP15.49■□□□□ 0.07
CLIP3-206ENST00000593074 DOPEY1Q5JWR5 2465 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 TRAV30A0A087WSZ9 112 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 TRBV9A0A0B4J1U6 114 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 H3BRN7 92 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 CBLN1P23435 193 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 ATP5J2P56134 94 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 ZNF491Q8N8L2 437 aa15.49■□□□□ 0.07
CLIP3-206ENST00000593074 IGHV7-81A0A0B4J1V7 117 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 HLA-DRB1P01911 266 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 HIST1H1EP10412 219 aaKnown RBP15.48■□□□□ 0.07
CLIP3-206ENST00000593074 EGR2P11161 476 aaPredicted RBP15.48■□□□□ 0.07
CLIP3-206ENST00000593074 UBE2G1P62253 170 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 CLEC2AQ6UVW9 174 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 ZNF843Q8N446 348 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 TMEM68Q96MH6 324 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 C7orf69Q9H7B7 122 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 C1RLQ9NZP8 487 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 F8W735 103 aaPredicted RBP15.48■□□□□ 0.07
CLIP3-206ENST00000593074 BRS3P32247 399 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 RNF125Q96EQ8 232 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 OTORQ9NRC9 128 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 ZNF586Q9NXT0 402 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 WNK2Q9Y3S1 2297 aa15.48■□□□□ 0.07
CLIP3-206ENST00000593074 IGHV4-61A0A0C4DH41 118 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 WI2-2373I1.2A0A1W2PRP0 233 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 MFAP4P55083 255 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 RPL19P84098 196 aaKnown RBP15.47■□□□□ 0.07
CLIP3-206ENST00000593074 DNLZQ5SXM8 178 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 FAM120AOSQ5T036 256 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 TMEM190Q8WZ59 177 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 MBD6Q96DN6 1003 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 FMC1Q96HJ9 113 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 GNB1LQ9BYB4 327 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 MED13LQ71F56 2210 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 ZNF705GA8MUZ8 300 aaPredicted RBP15.47■□□□□ 0.07
CLIP3-206ENST00000593074 VWC2LB2RUY7 222 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 GNG7O60262 68 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 TCRAP04437 139 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 PAX8Q06710 450 aa15.47■□□□□ 0.07
CLIP3-206ENST00000593074 MRPL18Q9H0U6 180 aaKnown RBP15.47■□□□□ 0.07
CLIP3-206ENST00000593074 H3BTX0 84 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 NPFFO15130 113 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 IL4P05112 153 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 IER3P46695 156 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 GPR82Q96P67 336 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 SERTAD4Q9NUC0 356 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 THYN1Q9P016 225 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 S4R3C0 116 aa15.46■□□□□ 0.07
CLIP3-206ENST00000593074 FRMD6-AS1P0C7T7 363 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 CDPF1Q6NVV7 123 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 MLST8Q9BVC4 326 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 CENPVL3A0A0U1RRI6 287 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 SNURFLB1AK76 121 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 LTAP01374 205 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 MT-ND6P03923 174 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 COX19Q49B96 90 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 BPIFA4PQ86YQ2 179 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 PIP4P2Q8N4L2 257 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 C21orf62Q9NYP8 219 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 RNF24Q9Y225 148 aa15.45■□□□□ 0.06
CLIP3-206ENST00000593074 IGLC2P0DOY2 106 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 TCL1AP56279 114 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 WDR73Q6P4I2 378 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 GBGT1Q8N5D6 347 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 NUDT10Q8NFP7 164 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 NUDT11Q96G61 164 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 RPH3ALQ9UNE2 315 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 TRBV19A0A075B6N1 114 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 GATCO43716 136 aaKnown RBP15.44■□□□□ 0.06
CLIP3-206ENST00000593074 NDUFB8O95169 186 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 HSPB9Q9BQS6 159 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 CHRDL1Q9BU40 450 aa15.44■□□□□ 0.06
CLIP3-206ENST00000593074 IZUMO1RA6ND01 250 aa15.43■□□□□ 0.06
CLIP3-206ENST00000593074 MRPS12O15235 138 aaKnown RBP15.43■□□□□ 0.06
CLIP3-206ENST00000593074 CA1P00915 261 aaPredicted RBP15.43■□□□□ 0.06
CLIP3-206ENST00000593074 USF2Q15853 346 aaPredicted RBP15.43■□□□□ 0.06
CLIP3-206ENST00000593074 KLK9Q2XQG4 91 aa15.43■□□□□ 0.06
CLIP3-206ENST00000593074 GRAMD2BQ96HH9 432 aa15.43■□□□□ 0.06
CLIP3-206ENST00000593074 KLK9Q9UKQ9 250 aa15.43■□□□□ 0.06
CLIP3-206ENST00000593074 IGHV4-30-2A0A087WSY4 118 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 Q56UQ5 140 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 TMEM136Q6ZRR5 245 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 S100A7AQ86SG5 101 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 OR4F17Q8NGA8 305 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 TMEM18Q96B42 140 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 USP9XQ93008 2570 aaPredicted RBP15.42■□□□□ 0.06
CLIP3-206ENST00000593074 OR2J3O76001 311 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 FCGR2BP31994 310 aaPredicted RBP15.42■□□□□ 0.06
CLIP3-206ENST00000593074 FAM110DQ8TAY7 271 aaPredicted RBP15.42■□□□□ 0.06
CLIP3-206ENST00000593074 SGK494Q96LW2 274 aa15.42■□□□□ 0.06
CLIP3-206ENST00000593074 A0A1B0GUS0 222 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 AMY1AP04745 511 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 COX6B1P14854 86 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 SLC35B1P78383 322 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 PRR27Q6MZM9 219 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 LYPD1Q8N2G4 141 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 EXOC3-AS1Q8N2X6 119 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 FLNCQ14315 2725 aa15.41■□□□□ 0.06
CLIP3-206ENST00000593074 SPINK4O60575 86 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms