RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 OR7C2O60412 319 aa17.58■□□□□ 0.41
SPHK1-210ENST00000592299 C8orf88P0DMB2 117 aa17.58■□□□□ 0.41
SPHK1-210ENST00000592299 SRSF2Q01130 221 aaKnown RBP17.58■□□□□ 0.41
SPHK1-210ENST00000592299 USF2Q15853 346 aaPredicted RBP17.58■□□□□ 0.41
SPHK1-210ENST00000592299 LINC01006Q8NI28 216 aa17.58■□□□□ 0.41
SPHK1-210ENST00000592299 C16orf95Q9H693 158 aa17.58■□□□□ 0.41
SPHK1-210ENST00000592299 MRPL27Q9P0M9 148 aaKnown RBP17.58■□□□□ 0.41
SPHK1-210ENST00000592299 GUK1Q16774 197 aa17.58■□□□□ 0.4
SPHK1-210ENST00000592299 HAGHQ16775 308 aa17.58■□□□□ 0.4
SPHK1-210ENST00000592299 KHDC3LQ587J8 217 aa17.58■□□□□ 0.4
SPHK1-210ENST00000592299 RNF152Q8N8N0 203 aa17.58■□□□□ 0.4
SPHK1-210ENST00000592299 TMEM231Q9H6L2 316 aa17.58■□□□□ 0.4
SPHK1-210ENST00000592299 SRSF3P84103 164 aaKnown RBP17.57■□□□□ 0.4
SPHK1-210ENST00000592299 TOMM20LQ6UXN7 152 aa17.57■□□□□ 0.4
SPHK1-210ENST00000592299 LINC00052Q96N35 136 aa17.57■□□□□ 0.4
SPHK1-210ENST00000592299 SLC25A39Q9BZJ4 359 aaPredicted RBP17.57■□□□□ 0.4
SPHK1-210ENST00000592299 LEMD1Q68G75 181 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 MYOZ3Q8TDC0 251 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 SLC25A2Q9BXI2 301 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 PEF1Q9UBV8 284 aaKnown RBP17.56■□□□□ 0.4
SPHK1-210ENST00000592299 BMPR1BO00238 502 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 PQLC2Q6ZP29 291 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 ZNF414Q96IQ9 312 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 UBE2E2Q96LR5 201 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 RARRES2Q99969 163 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 TREM1Q9NP99 234 aa17.56■□□□□ 0.4
SPHK1-210ENST00000592299 RBFOX3A6NFN3 312 aa17.55■□□□□ 0.4
SPHK1-210ENST00000592299 GCHFRP30047 84 aa17.55■□□□□ 0.4
SPHK1-210ENST00000592299 KHDC1LQ5JSQ8 128 aa17.55■□□□□ 0.4
SPHK1-210ENST00000592299 FAM209BQ5JX69 171 aa17.55■□□□□ 0.4
SPHK1-210ENST00000592299 FAM167A-AS1Q96KT0 104 aa17.55■□□□□ 0.4
SPHK1-210ENST00000592299 SCRT1Q9BWW7 348 aa17.55■□□□□ 0.4
SPHK1-210ENST00000592299 HAX1O00165 279 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 NDUFA7O95182 113 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 IFNA1P01562 189 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 PSMB3P49720 205 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 S100A7AQ86SG5 101 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 NARS2Q96I59 477 aaKnown RBP17.54■□□□□ 0.4
SPHK1-210ENST00000592299 ZFAND3Q9H8U3 227 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 RABAC1Q9UI14 185 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 TMEM218A2RU14 115 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 GGCTO75223 188 aaKnown RBP17.54■□□□□ 0.4
SPHK1-210ENST00000592299 OR10J4P0C629 311 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 ZNF503Q96F45 646 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 C20orf24Q9BUV8 137 aa17.54■□□□□ 0.4
SPHK1-210ENST00000592299 LGALS1P09382 135 aaKnown RBP17.53■□□□□ 0.4
SPHK1-210ENST00000592299 TCTEX1D4Q5JR98 221 aa17.53■□□□□ 0.4
SPHK1-210ENST00000592299 OR4F5Q8NH21 305 aa17.53■□□□□ 0.4
SPHK1-210ENST00000592299 SHANK2-AS3Q9BTD1 123 aa17.53■□□□□ 0.4
SPHK1-210ENST00000592299 H3BRN7 92 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 PYYP10082 97 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 BCL2P10415 239 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 UBE2G2P60604 165 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 PEA15Q15121 130 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 PAXXQ9BUH6 204 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 OR51M1Q9H341 326 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 SMDT1Q9H4I9 107 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 MANBALQ9NQG1 85 aa17.52■□□□□ 0.4
SPHK1-210ENST00000592299 CD5P06127 495 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 C11orf44Q8N8P7 122 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 RXFP4Q8TDU9 374 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 RNF114Q9Y508 228 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 ZNF98A6NK75 572 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 NDUFA4O00483 81 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 PAGE4O60829 102 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 PPT1P50897 306 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 UBE2L3P68036 154 aaKnown RBP17.51■□□□□ 0.39
SPHK1-210ENST00000592299 PMS2P11Q13670 270 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 WIPF2Q8TF74 440 aaPredicted RBP17.51■□□□□ 0.39
SPHK1-210ENST00000592299 TMEM167BQ9NRX6 74 aa17.51■□□□□ 0.39
SPHK1-210ENST00000592299 LOC102723971A0A1B0GUV8 181 aa17.5■□□□□ 0.39
SPHK1-210ENST00000592299 ZNF320A2RRD8 509 aa17.5■□□□□ 0.39
SPHK1-210ENST00000592299 ZNF207O43670 478 aaKnown RBP17.5■□□□□ 0.39
SPHK1-210ENST00000592299 ZNF506Q5JVG8 444 aa17.5■□□□□ 0.39
SPHK1-210ENST00000592299 C10orf91Q5T1B1 145 aa17.5■□□□□ 0.39
SPHK1-210ENST00000592299 HIST2H2BDQ6DRA6 164 aa17.5■□□□□ 0.39
SPHK1-210ENST00000592299 STXBP6Q8NFX7 210 aa17.5■□□□□ 0.39
SPHK1-210ENST00000592299 SNRPCP09234 159 aaKnown RBP17.49■□□□□ 0.39
SPHK1-210ENST00000592299 CDX1P47902 265 aaPredicted RBP17.49■□□□□ 0.39
SPHK1-210ENST00000592299 ICAM4Q14773 271 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 UNQ9165/PRO28630Q6UXU0 137 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 C18orf65Q6ZTR6 163 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 METTL26Q96S19 204 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 VAX2Q9UIW0 290 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 SETD2Q9BYW2 2564 aaPredicted RBP17.49■□□□□ 0.39
SPHK1-210ENST00000592299 S100A7P31151 101 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 RPEL1Q2QD12 228 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 CST9LP1Q5W188 147 aa17.49■□□□□ 0.39
SPHK1-210ENST00000592299 CLPSL1A2RUU4 121 aa17.48■□□□□ 0.39
SPHK1-210ENST00000592299 C9JQL5 133 aa17.48■□□□□ 0.39
SPHK1-210ENST00000592299 NPPCP23582 126 aa17.48■□□□□ 0.39
SPHK1-210ENST00000592299 SEC11CQ9BY50 192 aa17.48■□□□□ 0.39
SPHK1-210ENST00000592299 CD28P10747 220 aa17.47■□□□□ 0.39
SPHK1-210ENST00000592299 FAM106AQ4KMX7 169 aa17.47■□□□□ 0.39
SPHK1-210ENST00000592299 BPIFA4PQ86YQ2 179 aa17.47■□□□□ 0.39
SPHK1-210ENST00000592299 CARHSP1Q9Y2V2 147 aaKnown RBP17.47■□□□□ 0.39
SPHK1-210ENST00000592299 NIPBLQ6KC79 2804 aaeCLIP17.47■□□□□ 0.39
SPHK1-210ENST00000592299 IGHV4OR15-8A0A075B7B6 117 aa17.47■□□□□ 0.39
SPHK1-210ENST00000592299 A0A087WW49 117 aa17.47■□□□□ 0.39
SPHK1-210ENST00000592299 HSPB1P04792 205 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms