RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 ZNF705GA8MUZ8 300 aaPredicted RBP12.39□□□□□ -0.43
MBD1-227ENST00000592060 F8W735 103 aaPredicted RBP12.39□□□□□ -0.43
MBD1-227ENST00000592060 IGHV4-39P01824 125 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 HIST1H1EP10412 219 aaKnown RBP12.39□□□□□ -0.43
MBD1-227ENST00000592060 EGR2P11161 476 aaPredicted RBP12.39□□□□□ -0.43
MBD1-227ENST00000592060 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 Q8N9W7 124 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 GNB1LQ9BYB4 327 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 WI2-2373I1.2A0A1W2PRP0 233 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 TCL1AP56279 114 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 UBE2G1P62253 170 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 FAM120AOSQ5T036 256 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 FAM168AQ92567 244 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 TMEM68Q96MH6 324 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
MBD1-227ENST00000592060 TCRAP04437 139 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 TMEM136Q6ZRR5 245 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 RNF125Q96EQ8 232 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 FMC1Q96HJ9 113 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 MLST8Q9BVC4 326 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 SERTAD4Q9NUC0 356 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 S4R3C0 116 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 TACC2O95359 2948 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
MBD1-227ENST00000592060 TRAV30A0A087WSZ9 112 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
MBD1-227ENST00000592060 CA1P00915 261 aaPredicted RBP12.38□□□□□ -0.43
MBD1-227ENST00000592060 SAA4P35542 130 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 MFAP4P55083 255 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 JOSD1Q15040 202 aaPredicted RBP12.38□□□□□ -0.43
MBD1-227ENST00000592060 WDR73Q6P4I2 378 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 TMEM256Q8N2U0 113 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 TMEM18Q96B42 140 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 PRDM13Q9H4Q3 707 aa12.38□□□□□ -0.43
MBD1-227ENST00000592060 ABCA1O95477 2261 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
MBD1-227ENST00000592060 LTAP01374 205 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 HLA-DRB1P01911 266 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 MT-ND6P03923 174 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
MBD1-227ENST00000592060 COX19Q49B96 90 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 OR5R1Q8NH85 324 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 GRAMD2BQ96HH9 432 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 GPR82Q96P67 336 aa12.37□□□□□ -0.43
MBD1-227ENST00000592060 POLR3KQ9Y2Y1 108 aaPredicted RBP12.37□□□□□ -0.43
MBD1-227ENST00000592060 GRIFINA4D1Z8 144 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 GNG7O60262 68 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 NUPR1O60356 82 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 SPINK4O60575 86 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 NDUFB8O95169 186 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 AMY1AP04745 511 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 IL4P05112 153 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 IGLC2P0DOY2 106 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 LINC00310P59036 64 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 CTAG1AP78358 180 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 SLC35B1P78383 322 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 SGK494Q96LW2 274 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 LPAR2Q9HBW0 351 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 USF2Q15853 346 aaPredicted RBP12.36□□□□□ -0.43
MBD1-227ENST00000592060 TMEM190Q8WZ59 177 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 HSPB9Q9BQS6 159 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
MBD1-227ENST00000592060 WNK2Q9Y3S1 2297 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 TRBV19A0A075B6N1 114 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 GOSR1O95249 250 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 GZMBP10144 247 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 PRR27Q6MZM9 219 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 BPIFA4PQ86YQ2 179 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 CHRDL1Q9BU40 450 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 ZNF492Q9P255 531 aa12.35□□□□□ -0.43
MBD1-227ENST00000592060 FLNBO75369 2602 aaKnown RBP12.35□□□□□ -0.43
MBD1-227ENST00000592060 NPFFO15130 113 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 CRISP2P16562 243 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 BRS3P32247 399 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 MRPL54Q6P161 138 aaKnown RBP12.34□□□□□ -0.43
MBD1-227ENST00000592060 Q86TA4 180 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 BCL6BQ8N143 479 aaPredicted RBP12.34□□□□□ -0.43
MBD1-227ENST00000592060 EXOC3-AS1Q8N2X6 119 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 KLK9Q9UKQ9 250 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 TRBV6-1A0A0K0K1D8 114 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 OR2J3O76001 311 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 IGLV2-11P01706 119 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 ESDP10768 282 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 Q0VG73 95 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 Q56UQ5 140 aa12.34□□□□□ -0.43
MBD1-227ENST00000592060 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
MBD1-227ENST00000592060 OR4F17Q8NGA8 305 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms