RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 FAM168AQ92567 244 aa15.51■□□□□ 0.07
MBD3-209ENST00000592012 SERTAD4Q9NUC0 356 aa15.51■□□□□ 0.07
MBD3-209ENST00000592012 CACNA1BQ00975 2339 aa15.51■□□□□ 0.07
MBD3-209ENST00000592012 IGHV7-81A0A0B4J1V7 117 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 ZNF705GA8MUZ8 300 aaPredicted RBP15.5■□□□□ 0.07
MBD3-209ENST00000592012 HIST1H1EP10412 219 aaKnown RBP15.5■□□□□ 0.07
MBD3-209ENST00000592012 SAA4P35542 130 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 IER3P46695 156 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 SGK494Q96LW2 274 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 TMEM68Q96MH6 324 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 ATG101Q9BSB4 218 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 UBE2G1P62253 170 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 SHANK2-AS3Q9BTD1 123 aa15.5■□□□□ 0.07
MBD3-209ENST00000592012 MRPL18Q9H0U6 180 aaKnown RBP15.5■□□□□ 0.07
MBD3-209ENST00000592012 F8W735 103 aaPredicted RBP15.49■□□□□ 0.07
MBD3-209ENST00000592012 CA1P00915 261 aaPredicted RBP15.49■□□□□ 0.07
MBD3-209ENST00000592012 MFAP4P55083 255 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 TCL1AP56279 114 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 RNF125Q96EQ8 232 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 ZNF48Q96MX3 618 aaPredicted RBP15.49■□□□□ 0.07
MBD3-209ENST00000592012 GNB1LQ9BYB4 327 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 C7orf69Q9H7B7 122 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 LPAR2Q9HBW0 351 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 C1RLQ9NZP8 487 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 DOPEY1Q5JWR5 2465 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 TRAV30A0A087WSZ9 112 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 GNG7O60262 68 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 SPINK4O60575 86 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 TCRAP04437 139 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 NUDT10Q8NFP7 164 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 NUDT11Q96G61 164 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 RPH3ALQ9UNE2 315 aa15.49■□□□□ 0.07
MBD3-209ENST00000592012 USP9XQ93008 2570 aaPredicted RBP15.48■□□□□ 0.07
MBD3-209ENST00000592012 TRBV9A0A0B4J1U6 114 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 WI2-2373I1.2A0A1W2PRP0 233 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 SNURFLB1AK76 121 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 H3BRN7 92 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 IL4P05112 153 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 MBD6Q96DN6 1003 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 SMIM12Q96EX1 92 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 GPR82Q96P67 336 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 MLST8Q9BVC4 326 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 SPG11Q96JI7 2443 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 ABCA2Q9BZC7 2435 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 BRS3P32247 399 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 SLC35B1P78383 322 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 PIP4P2Q8N4L2 257 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 OTORQ9NRC9 128 aa15.48■□□□□ 0.07
MBD3-209ENST00000592012 POLR3KQ9Y2Y1 108 aaPredicted RBP15.48■□□□□ 0.07
MBD3-209ENST00000592012 A0A1B0GUS0 222 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 HLA-DRB1P01911 266 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 RPL19P84098 196 aaKnown RBP15.47■□□□□ 0.07
MBD3-209ENST00000592012 THYN1Q9P016 225 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 NDUFB8O95169 186 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 BPIFA4PQ86YQ2 179 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 TMEM256Q8N2U0 113 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 GBGT1Q8N5D6 347 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 FMC1Q96HJ9 113 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 C21orf62Q9NYP8 219 aa15.47■□□□□ 0.07
MBD3-209ENST00000592012 USP24Q9UPU5 2620 aa15.46■□□□□ 0.07
MBD3-209ENST00000592012 GATCO43716 136 aaKnown RBP15.46■□□□□ 0.07
MBD3-209ENST00000592012 PRR27Q6MZM9 219 aa15.46■□□□□ 0.07
MBD3-209ENST00000592012 HSPB9Q9BQS6 159 aa15.46■□□□□ 0.07
MBD3-209ENST00000592012 CENPVL3A0A0U1RRI6 287 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 GRIFINA4D1Z8 144 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 NPFFO15130 113 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 LTAP01374 205 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 IGLC2P0DOY2 106 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 USF2Q15853 346 aaPredicted RBP15.46■□□□□ 0.06
MBD3-209ENST00000592012 DNLZQ5SXM8 178 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 BCL6BQ8N143 479 aaPredicted RBP15.46■□□□□ 0.06
MBD3-209ENST00000592012 EXOC3-AS1Q8N2X6 119 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 TMEM18Q96B42 140 aa15.46■□□□□ 0.06
MBD3-209ENST00000592012 IZUMO1RA6ND01 250 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 LINC00587B1AMM8 73 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 NUPR1O60356 82 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 OR2J3O76001 311 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 FCGR2BP31994 310 aaPredicted RBP15.45■□□□□ 0.06
MBD3-209ENST00000592012 Q56UQ5 140 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 WDR73Q6P4I2 378 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 TMEM136Q6ZRR5 245 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 GRAMD2BQ96HH9 432 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 CELSR1Q9NYQ6 3014 aa15.45■□□□□ 0.06
MBD3-209ENST00000592012 TRBV19A0A075B6N1 114 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 MRPS12O15235 138 aaKnown RBP15.44■□□□□ 0.06
MBD3-209ENST00000592012 JOSD1Q15040 202 aaPredicted RBP15.44■□□□□ 0.06
MBD3-209ENST00000592012 C17orf77Q96MU5 243 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 RNF24Q9Y225 148 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 MT-ND6P03923 174 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 PAX8Q06710 450 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 COX19Q49B96 90 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 NAT8BQ9UHF3 227 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 TP53TG3Q9ULZ0 132 aa15.44■□□□□ 0.06
MBD3-209ENST00000592012 IGHV3-23P01764 117 aa15.43■□□□□ 0.06
MBD3-209ENST00000592012 CRISP2P16562 243 aa15.43■□□□□ 0.06
MBD3-209ENST00000592012 MRPL54Q6P161 138 aaKnown RBP15.43■□□□□ 0.06
MBD3-209ENST00000592012 OR4F17Q8NGA8 305 aa15.43■□□□□ 0.06
MBD3-209ENST00000592012 CCL19Q99731 98 aa15.43■□□□□ 0.06
MBD3-209ENST00000592012 CHRDL1Q9BU40 450 aa15.43■□□□□ 0.06
MBD3-209ENST00000592012 PRDM13Q9H4Q3 707 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms