RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 POLR2GP62487 172 aaKnown RBP eCLIP7.06□□□□□ -1.28
BRCA1-226ENST00000591534 LAMTOR1Q6IAA8 161 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 C19orf35Q6ZS72 473 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 Q6ZWC4 215 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 TMUB2Q71RG4 321 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 TMEM61Q8N0U2 210 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 SLC24A4Q8NFF2 622 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 LINC00476Q8WZB0 136 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 PARD6GQ9BYG4 376 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-226ENST00000591534 RBKSQ9H477 322 aa7.06□□□□□ -1.28
BRCA1-226ENST00000591534 MRPL27Q9P0M9 148 aaKnown RBP7.06□□□□□ -1.28
BRCA1-226ENST00000591534 RCL1Q9Y2P8 373 aaKnown RBP7.06□□□□□ -1.28
BRCA1-226ENST00000591534 MPTX1A8MV57 137 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 TEX22C9J3V5 150 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 E7EUB6 86 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 C17orf112F2Z3M2 114 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 MBP02144 154 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 IFNA4P05014 189 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 CLEC3BP05452 202 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 NPY1RP25929 384 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 GPX4P36969 197 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-226ENST00000591534 OPCMLQ14982 345 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 C2orf83Q53S99 150 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 SPANXN5Q5MJ07 72 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 C9orf62Q8N4C0 152 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 TMEM252Q8N6L7 170 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 ZNF709Q8N972 641 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 UBAC2Q8NBM4 344 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 ZNF114Q8NC26 417 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 STOML3Q8TAV4 291 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 ST8SIA2Q92186 375 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 ATP6V0BQ99437 205 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 SPAG8Q99932 426 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-226ENST00000591534 OVOL2Q9BRP0 275 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 RNF126Q9BV68 326 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 WFDC10AQ9H1F0 79 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 NDUFA4L2Q9NRX3 87 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 DMRT1Q9Y5R6 373 aa7.05□□□□□ -1.28
BRCA1-226ENST00000591534 TRAV14DV4A0A0A6YYC5 116 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 A0A1B0GW64 132 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 TMEM213A2RRL7 107 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 UMAD1C9J7I0 102 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 BOLA2-SMG1P6H3BVE0 249 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 SPRY2O43597 315 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 IGHV3-23P01764 117 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 CTRB1P17538 263 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 RAB2AP61019 212 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 NDUFA5Q16718 116 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 KLK9Q2XQG4 91 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 CTRB2Q6GPI1 263 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-226ENST00000591534 BTNL8Q6UX41 500 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 OR1P1Q8NH06 330 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 ATP5SQ99766 215 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 TMEM147Q9BVK8 224 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 HINT2Q9BX68 163 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-226ENST00000591534 MLXQ9UH92 298 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 KLK9Q9UKQ9 250 aa7.04□□□□□ -1.28
BRCA1-226ENST00000591534 PAIP2BQ9ULR5 123 aaKnown RBP7.04□□□□□ -1.28
BRCA1-226ENST00000591534 KIR2DL5BA0A0G2JN68 375 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 KIR2DL5BA0A0G2JPC4 375 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 TEX50A0A1B0GTY4 177 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 CFDP00746 253 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-226ENST00000591534 C8orf88P0DMB2 117 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 AREGP15514 252 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 CMC4P56277 68 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-226ENST00000591534 DLK1P80370 383 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 SERF2P84101 59 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 EWSR1Q01844 656 aaKnown RBP eCLIP7.03□□□□□ -1.28
BRCA1-226ENST00000591534 PMS2P11Q13670 270 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 LGALSLQ3ZCW2 172 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-226ENST00000591534 TMEM14EPQ6UXP3 125 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 DPPA3Q6W0C5 159 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 Q6ZRM9 215 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 BAP18Q8IXM2 172 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 KIR2DL5AQ8N109 375 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 KIR2DL5BQ8NHK3 375 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 MAGT1Q9H0U3 335 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 NPVFQ9HCQ7 196 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 UQCC1Q9NVA1 299 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 OR5AC2Q9NZP5 309 aa7.03□□□□□ -1.28
BRCA1-226ENST00000591534 IGLV11-55A0A075B6I3 123 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 TRAV30A0A087WSZ9 112 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 TRAV3A0A0B4J244 114 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 A0A0G2JRQ6 117 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 A0A0J9YWU9 116 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 CGB1A6NKQ9 187 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 TSPAN4O14817 238 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 GPR183P32249 361 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 PXDC1Q5TGL8 231 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 SPSB3Q6PJ21 355 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 OR11H4Q8NGC9 324 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 OR5C1Q8NGR4 320 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 VN1R17PQ8TDU5 208 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 SLC35E1Q96K37 410 aa7.02□□□□□ -1.29
BRCA1-226ENST00000591534 DAZ1Q9NQZ3 744 aaKnown RBP7.02□□□□□ -1.29
BRCA1-226ENST00000591534 UBQLN2Q9UHD9 624 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms