RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CYP2G1PQ6ZSU1 146 aa13.35□□□□□ -0.27
DDX39A-212ENST00000590260 TRPT1Q86TN4 253 aaKnown RBP13.35□□□□□ -0.27
DDX39A-212ENST00000590260 MARVELD1Q9BSK0 173 aa13.35□□□□□ -0.27
DDX39A-212ENST00000590260 CSTL1Q9H114 145 aa13.35□□□□□ -0.27
DDX39A-212ENST00000590260 NRN1Q9NPD7 142 aa13.35□□□□□ -0.27
DDX39A-212ENST00000590260 SMCO3A2RU48 225 aa13.34□□□□□ -0.27
DDX39A-212ENST00000590260 SIX6O95475 246 aa13.34□□□□□ -0.27
DDX39A-212ENST00000590260 LYL1P12980 280 aa13.34□□□□□ -0.27
DDX39A-212ENST00000590260 AP2S1P53680 142 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-212ENST00000590260 DEFB1P60022 68 aa13.34□□□□□ -0.27
DDX39A-212ENST00000590260 RAB32Q13637 225 aa13.34□□□□□ -0.27
DDX39A-212ENST00000590260 LYSTQ99698 3801 aa13.34□□□□□ -0.27
DDX39A-212ENST00000590260 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 INMT-MINDY4F8WBC2 141 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 FABP1P07148 127 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 PSMG4Q5JS54 123 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 SLC25A32Q9H2D1 315 aa13.33□□□□□ -0.28
DDX39A-212ENST00000590260 C4BPBP20851 252 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 SLC38A11Q08AI6 406 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 PATE2Q6UY27 113 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 BPIFCQ8NFQ6 507 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 OR10P1Q8NGE3 313 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 NPVFQ9HCQ7 196 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 SLC45A2Q9UMX9 530 aa13.32□□□□□ -0.28
DDX39A-212ENST00000590260 RYR2Q92736 4967 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 A0A0J9YWU9 116 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 IGSF23A1L1A6 192 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 ZNF98A6NK75 572 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 DEDDO75618 318 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 CFDP00746 253 aaPredicted RBP13.31□□□□□ -0.28
DDX39A-212ENST00000590260 ORM2P19652 201 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 PLP1P60201 277 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 GDF5OSQ5U4N7 250 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 OR1B1Q8NGR6 318 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 SCRT1Q9BWW7 348 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 SEPSECSQ9HD40 501 aaKnown RBP13.31□□□□□ -0.28
DDX39A-212ENST00000590260 DOK5Q9P104 306 aa13.31□□□□□ -0.28
DDX39A-212ENST00000590260 H3BRN7 92 aa13.3□□□□□ -0.28
DDX39A-212ENST00000590260 L7N2F9 121 aa13.3□□□□□ -0.28
DDX39A-212ENST00000590260 CST7O76096 145 aa13.3□□□□□ -0.28
DDX39A-212ENST00000590260 NUP62P37198 522 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-212ENST00000590260 VAMP2P63027 116 aa13.3□□□□□ -0.28
DDX39A-212ENST00000590260 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
DDX39A-212ENST00000590260 MGST2Q99735 147 aa13.3□□□□□ -0.28
DDX39A-212ENST00000590260 LYRM2Q9NU23 88 aaPredicted RBP13.3□□□□□ -0.28
DDX39A-212ENST00000590260 PLECQ15149 4684 aaKnown RBP13.29□□□□□ -0.28
DDX39A-212ENST00000590260 H0YIZ8 118 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 GOSR2O14653 212 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 PRAF2O60831 178 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 CA1P00915 261 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-212ENST00000590260 LINC00869P0C866 280 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 CAV2P51636 162 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 H2BFSP57053 126 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 S100A10P60903 97 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 TEPPQ6URK8 271 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 STHQ8IWL8 128 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 C20orf173Q96LM9 149 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 UHRF2Q96PU4 802 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 GGACTQ9BVM4 153 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 SLC25A39Q9BZJ4 359 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-212ENST00000590260 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
DDX39A-212ENST00000590260 FBXL17Q9UF56 701 aa13.29□□□□□ -0.28
DDX39A-212ENST00000590260 AGPAT2O15120 278 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 BCAP31P51572 246 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 VWC2Q2TAL6 325 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 OR8I2Q8N0Y5 310 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 TMEM252Q8N6L7 170 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 PPP1R14BQ96C90 147 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 SHANK2-AS3Q9BTD1 123 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 SLC25A22Q9H936 323 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 MGAT4CQ9UBM8 478 aa13.28□□□□□ -0.28
DDX39A-212ENST00000590260 H3BMM0 161 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 SELENOTP62341 195 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 TMEM217Q8N7C4 229 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 IL17DQ8TAD2 202 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 GATAD1Q8WUU5 269 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 TMEM147Q9BVK8 224 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 OR5AC2Q9NZP5 309 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.29
DDX39A-212ENST00000590260 TRAV8-2A0A0B4J237 113 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
DDX39A-212ENST00000590260 SULT1A1P50225 295 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 DEFA1P59665 94 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 DEFA3P59666 94 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 SNRPD3P62318 126 aaKnown RBP13.26□□□□□ -0.29
DDX39A-212ENST00000590260 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 RSG1Q9BU20 258 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 NMES1Q9C002 83 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 ARL6Q9H0F7 186 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 HIGD1AQ9Y241 93 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 WDR83OSQ9Y284 106 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 TENM2Q9NT68 2774 aa13.26□□□□□ -0.29
DDX39A-212ENST00000590260 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 HYPMO75409 117 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 HLA-DRB4P13762 266 aa13.25□□□□□ -0.29
DDX39A-212ENST00000590260 PSMB3P49720 205 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms