RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 SMIM9A6NGZ8 99 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 OR4C46A6NHA9 309 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 SNURFLB1AK76 121 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 F5H5K5 113 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 XRCC2O43543 280 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 HSBP1O75506 76 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 FCN3O75636 299 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 NUDT14O95848 222 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 HMGN2P05204 90 aaKnown RBP4.66□□□□□ -1.66
SMAD4-208ENST00000589706 IGHV4-31P0DP07 118 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 CBLN1P23435 193 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 GFERP55789 205 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 DSCR9P59020 149 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 SLC35B1P78383 322 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 MEF2CQ06413 473 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-208ENST00000589706 PSG7Q13046 419 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 KIR2DS1Q14954 304 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 OR8B8Q15620 311 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 RPEL1Q2QD12 228 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 SPATA12Q7Z6I5 190 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 LRRC75A-AS1Q8N1F1 130 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 TPRX1Q8N7U7 411 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 OR8B12Q8NGG6 310 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 OR6K6Q8NGW6 343 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 PFN4Q8NHR9 129 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 TMEM158Q8WZ71 300 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 DUX5Q96PT3 197 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 TNFRSF13CQ96RJ3 184 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 C19orf24Q9BVV8 132 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 RBM24Q9BX46 236 aaKnown RBP4.66□□□□□ -1.66
SMAD4-208ENST00000589706 PECRQ9BY49 303 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 GLIPR2Q9H4G4 154 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 KCNIP2Q9NS61 270 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 TAS2R4Q9NYW5 299 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 OR1A1Q9P1Q5 309 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 POLDIP2Q9Y2S7 368 aa4.66□□□□□ -1.66
SMAD4-208ENST00000589706 CHD3Q12873 2000 aaKnown RBP4.65□□□□□ -1.66
SMAD4-208ENST00000589706 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 A0A1B0GX51 115 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 A0A1W2PRD5 423 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 A0A1W2PRE2 83 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 A0A1W2PRF3 423 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 A0A1W2PRM7 423 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 C2orf70A6NJV1 201 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ZNF878C9JN71 531 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 SYS1-DBNDD2H3BUS1 97 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 SOCS1O15524 211 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ANGPTL7O43827 346 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 EML2O95834 649 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 CA1P00915 261 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-208ENST00000589706 CRYGBP07316 175 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 IFI6P09912 130 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 SMIM13P0DJ93 91 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 GATA2P23769 480 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-208ENST00000589706 FOXG1P55316 489 aaPredicted RBP4.65□□□□□ -1.67
SMAD4-208ENST00000589706 PAX9P55771 341 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 RPS28P62857 69 aaKnown RBP4.65□□□□□ -1.67
SMAD4-208ENST00000589706 UNC119Q13432 240 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ARFRP1Q13795 201 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ZNF726P1Q15940 193 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 CLEC12BQ2HXU8 276 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ABCA11PQ4W5N1 156 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ASPHD2Q6ICH7 369 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 Q6ZUT4 128 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 TCF23Q7RTU1 214 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 ZNF645Q8N7E2 425 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 OR2M3Q8NG83 312 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 OR13C6PQ8NH95 151 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 CHCHD1Q96BP2 118 aaKnown RBP4.65□□□□□ -1.67
SMAD4-208ENST00000589706 RAB40CQ96S21 281 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 NMNAT3Q96T66 252 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 CHRNA10Q9GZZ6 450 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 MAP1LC3AQ9H492 121 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 LYRM4Q9HD34 91 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 SH2D2AQ9NP31 389 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 NECAP2Q9NVZ3 263 aa4.65□□□□□ -1.67
SMAD4-208ENST00000589706 TRAV27A0A087WT01 109 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 A0A0B4J2E0 115 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 A0A1B0GX12 115 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 C9JCJ5 164 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 PLPP1O14494 284 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 RENP00797 406 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 APOA2P02652 100 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 AREGP15514 252 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 CA6P23280 308 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 NCBP2P52298 156 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMAD4-208ENST00000589706 RPL8P62917 257 aaKnown RBP4.64□□□□□ -1.67
SMAD4-208ENST00000589706 HBG1P69891 147 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 HBG2P69892 147 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 FHL1Q13642 323 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 ZNF146Q15072 292 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 PSG5Q15238 335 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 C3AR1Q16581 482 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 Q56UQ5 140 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 Q6AWC8 147 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 EBLN2Q6P2I7 272 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 IGFL2Q6UWQ7 119 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 TMEM136Q6ZRR5 245 aa4.64□□□□□ -1.67
SMAD4-208ENST00000589706 C2orf91Q6ZV80 131 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms