RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CRIPAKQ8N1N5 446 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 TMEM158Q8WZ71 300 aa12.01□□□□□ -0.49
SMARCA4-214ENST00000589677 NBR2O15453 112 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 CLPSP04118 112 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 SMIM27A0A1W2PRY6 76 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 LCTP09848 1927 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 IGHV3-49A0A0A0MS15 119 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 IGHV2-70DA0A0C4DH43 119 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 SIVA1O15304 175 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 TRGV3P03979 118 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 PDLIM4P50479 330 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 PRR31Q5SQ13 230 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 Q6P435 159 aa12□□□□□ -0.49
SMARCA4-214ENST00000589677 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 CCL25O15444 150 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 IGLV3-19P01714 112 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 FXYD7P58549 80 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 SLAQ13239 276 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 PYGO2Q9BRQ0 406 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 LINC00473A8K010 186 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 PMS2P5A8MQ11 134 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 FOXL2NBQ6ZUU3 175 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 C1orf147Q96MC9 270 aaPredicted RBP11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 ZNF581Q9P0T4 197 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 ETDBQ3ZM63 59 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 UNC13CQ8NB66 2214 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 PSPNO60542 156 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 SH2D1AO60880 128 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 LGALS9BQ3B8N2 356 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 LGALS9CQ6DKI2 356 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 SCRT1Q9BWW7 348 aa11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 RPUSD1Q9UJJ7 312 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-214ENST00000589677 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 Q86TA4 180 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 LGALS1P09382 135 aaKnown RBP11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 SP9P0CG40 484 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 CCL3L1P16619 93 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 TMEM167AQ8TBQ9 72 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 C9JAW5 83 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 CLEC19AQ6UXS0 136 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 C5orf24Q7Z6I8 188 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 CSTL1Q9H114 145 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 TMEM133Q9H2Q1 129 aa11.98□□□□□ -0.49
SMARCA4-214ENST00000589677 GREB1Q4ZG55 1949 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 VDAC2P45880 294 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 CITED1Q99966 193 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 MORN3Q6PF18 240 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 AMN1Q8IY45 258 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 EDA2RQ9HAV5 297 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 CD28P10747 220 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 TET1Q8NFU7 2136 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 TAL2Q16559 108 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 C9orf153Q5TBE3 101 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 CYYR1Q96J86 154 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 KLHDC3Q9BQ90 382 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 LSM4Q9Y4Z0 139 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 FREM3P0C091 2139 aa11.97□□□□□ -0.49
SMARCA4-214ENST00000589677 IGHV3OR16-12A0A075B7B8 117 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 SRRM5B3KS81 715 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 IGKV3-20P01619 116 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 TFF1P04155 84 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 S100A7L2Q5SY68 101 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 TP53BP1Q12888 1972 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 TRPM7Q96QT4 1865 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 OVOL1O14753 267 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 DEFB125Q8N687 156 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 C11orf52Q96A22 123 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 IGKV2-40A0A087WW87 121 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 IGKV2D-40P01614 121 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 CD7P09564 240 aa11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 APOBEC3AP31941 199 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 CEACAM8P31997 349 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-214ENST00000589677 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 NKX2-8O15522 239 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 UNQ6494/PRO21346Q6UXR6 183 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 LINC00479Q96M42 142 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 IGKV1-6A0A0C4DH72 117 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 IFITM1P13164 125 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 IGHV3OR16-8A0A075B7F1 116 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 SIP14410 1827 aa11.95□□□□□ -0.5
SMARCA4-214ENST00000589677 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 IL18BPO95998 194 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 ARMS2P0C7Q2 107 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 RNASE2P10153 161 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 MBNL3Q9NUK0 354 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 CABIN1Q9Y6J0 2220 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 RP1L1Q8IWN7 2480 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 ZNF114Q8NC26 417 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 NPFFR1Q9GZQ6 430 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 TOMM7Q9P0U1 55 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 HAX1O00165 279 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 CCL21O00585 134 aa11.94□□□□□ -0.5
SMARCA4-214ENST00000589677 FAM57AQ8TBR7 257 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms