RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 OR2C1O95371 312 aa16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 IL4P05112 153 aa16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 SYNJ2BPP57105 145 aa16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 LYZP61626 148 aa16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 RELQ04864 619 aaPredicted RBP16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 ACOT6Q3I5F7 207 aaPredicted RBP16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 Q8WTZ3 238 aa16.23■□□□□ 0.19
R3HDM4-204ENST00000589428 MBP02144 154 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 PLP1P60201 277 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 KLF5Q13887 457 aaPredicted RBP16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 C9orf66Q5T8R8 295 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 C1QL4Q86Z23 238 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 RPP25LQ8N5L8 163 aaKnown RBP16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 RNF141Q8WVD5 230 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 TMEM37Q8WXS4 190 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 RNF125Q96EQ8 232 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 ZFAND3Q9H8U3 227 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 FBN3Q75N90 2809 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 WI2-2373I1.2A0A1W2PRP0 233 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 ORM2P19652 201 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 RAB5CP51148 216 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 TOMM20LQ6UXN7 152 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 PATE2Q6UY27 113 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 OR10G4Q8NGN3 311 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 OR10G9Q8NGN4 311 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 OR10G7Q8NGN6 311 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 OR1B1Q8NGR6 318 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 FAM213BQ8TBF2 198 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 PCNPQ8WW12 178 aaKnown RBP16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 PBDC1Q9BVG4 233 aa16.22■□□□□ 0.19
R3HDM4-204ENST00000589428 IGHV3OR16-8A0A075B7F1 116 aa16.21■□□□□ 0.19
R3HDM4-204ENST00000589428 COX7A2P2O60397 106 aa16.21■□□□□ 0.19
R3HDM4-204ENST00000589428 USF2Q15853 346 aaPredicted RBP16.21■□□□□ 0.19
R3HDM4-204ENST00000589428 ELOVL1Q9BW60 279 aa16.21■□□□□ 0.19
R3HDM4-204ENST00000589428 ZNF726P1Q15940 193 aa16.2■□□□□ 0.18
R3HDM4-204ENST00000589428 PXDC1Q5TGL8 231 aa16.2■□□□□ 0.18
R3HDM4-204ENST00000589428 SSX7Q7RTT5 188 aa16.2■□□□□ 0.18
R3HDM4-204ENST00000589428 OR9G4Q8NGQ1 327 aa16.2■□□□□ 0.18
R3HDM4-204ENST00000589428 SEPSECSQ9HD40 501 aaKnown RBP16.2■□□□□ 0.18
R3HDM4-204ENST00000589428 ZNF705EA8MWA4 302 aaPredicted RBP16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 HYPMO75409 117 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 SAP30O75446 220 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 OR5G3P0C626 314 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 FAM122CQ6P4D5 195 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 DPPA3Q6W0C5 159 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 UHRF2Q96PU4 802 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 PFDN5Q99471 154 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 SLC25A22Q9H936 323 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 DNAJC4Q9NNZ3 241 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 PEMTQ9UBM1 199 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 NDUFA4O00483 81 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 EIF3GO75821 320 aaKnown RBP eCLIP16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 INSL3P51460 131 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 FAM106AQ4KMX7 169 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 C10orf113Q5VZT2 155 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 SPATA31B1PQ5VZV4 182 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 UNQ9165/PRO28630Q6UXU0 137 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 GPHB5Q86YW7 130 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 OR1L4Q8NGR5 311 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 GATAD1Q8WUU5 269 aa16.19■□□□□ 0.18
R3HDM4-204ENST00000589428 NOTCH1P46531 2555 aa16.18■□□□□ 0.18
R3HDM4-204ENST00000589428 ELOA3CA0A087WX78 387 aaPredicted RBP16.18■□□□□ 0.18
R3HDM4-204ENST00000589428 NMBP08949 121 aa16.18■□□□□ 0.18
R3HDM4-204ENST00000589428 MRPL27Q9P0M9 148 aaKnown RBP16.18■□□□□ 0.18
R3HDM4-204ENST00000589428 CDC34P49427 236 aaPredicted RBP16.17■□□□□ 0.18
R3HDM4-204ENST00000589428 BEAN1Q3B7T3 259 aa16.17■□□□□ 0.18
R3HDM4-204ENST00000589428 FAM78BQ5VT40 261 aa16.17■□□□□ 0.18
R3HDM4-204ENST00000589428 MORN5Q5VZ52 161 aa16.17■□□□□ 0.18
R3HDM4-204ENST00000589428 TMEM190Q8WZ59 177 aa16.17■□□□□ 0.18
R3HDM4-204ENST00000589428 HIGD1AQ9Y241 93 aa16.17■□□□□ 0.18
R3HDM4-204ENST00000589428 RHOBP62745 196 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 REC114Q7Z4M0 266 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 LRRC20Q8TCA0 184 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 RAB24Q969Q5 203 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 SAT2Q96F10 170 aaPredicted RBP16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 ACTR3CQ9C0K3 210 aaPredicted RBP16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 FUT9Q9Y231 359 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 ZNF320A2RRD8 509 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 LGALS9O00182 355 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 WIPF1O43516 503 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 KPRPQ5T749 579 aaPredicted RBP16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 MIR17HGQ75NE6 70 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 LINC00305Q7Z4B0 112 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 C20orf24Q9BUV8 137 aa16.16■□□□□ 0.18
R3HDM4-204ENST00000589428 CTXND1A0A1B0GTU2 59 aa16.15■□□□□ 0.18
R3HDM4-204ENST00000589428 A0A1W2PPV4 95 aa16.15■□□□□ 0.18
R3HDM4-204ENST00000589428 HMGB3O15347 200 aaKnown RBP16.15■□□□□ 0.18
R3HDM4-204ENST00000589428 MRPL32Q9BYC8 188 aaKnown RBP16.15■□□□□ 0.18
R3HDM4-204ENST00000589428 ZNF207O43670 478 aaKnown RBP16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 RNF2Q99496 336 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 SLC25A39Q9BZJ4 359 aaPredicted RBP16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 ZMAT5Q9UDW3 170 aaKnown RBP16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 RABAC1Q9UI14 185 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 H2AFB1P0C5Y9 115 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 RAB14P61106 215 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 BLOC1S1P78537 153 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 CLLU1Q5K131 121 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 LCN15Q6UWW0 184 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 SHANK2-AS3Q9BTD1 123 aa16.14■□□□□ 0.17
R3HDM4-204ENST00000589428 SCRT1Q9BWW7 348 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms