RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 CFDP00746 253 aaPredicted RBP11□□□□□ -0.65
CNN1-208ENST00000588935 GP9P14770 177 aa11□□□□□ -0.65
CNN1-208ENST00000588935 OPCMLQ14982 345 aa11□□□□□ -0.65
CNN1-208ENST00000588935 LAMTOR1Q6IAA8 161 aa11□□□□□ -0.65
CNN1-208ENST00000588935 LCN12Q6JVE5 192 aa11□□□□□ -0.65
CNN1-208ENST00000588935 ZNF709Q8N972 641 aa11□□□□□ -0.65
CNN1-208ENST00000588935 GRAMD2BQ96HH9 432 aa11□□□□□ -0.65
CNN1-208ENST00000588935 RSG1Q9BU20 258 aa11□□□□□ -0.65
CNN1-208ENST00000588935 NPCDR1Q9BY65 106 aa11□□□□□ -0.65
CNN1-208ENST00000588935 SLC25A22Q9H936 323 aa11□□□□□ -0.65
CNN1-208ENST00000588935 ZNF256Q9Y2P7 627 aaPredicted RBP11□□□□□ -0.65
CNN1-208ENST00000588935 PXMP4Q9Y6I8 212 aa11□□□□□ -0.65
CNN1-208ENST00000588935 NBEAL1Q6ZS30 2694 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 ZNF785A8K8V0 405 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 WIPF1O43516 503 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 BMI1P35226 326 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 LEMD1Q68G75 181 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 PATE2Q6UY27 113 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 Q6ZRG5 221 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 UHRF2Q96PU4 802 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 TMEM231Q9H6L2 316 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 VSIRQ9H7M9 311 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 SLC39A9Q9NUM3 307 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 U3KQE9 123 aa10.99□□□□□ -0.65
CNN1-208ENST00000588935 COX7A2P2O60397 106 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 MPDU1O75352 247 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 RPL29P47914 159 aaKnown RBP10.98□□□□□ -0.65
CNN1-208ENST00000588935 B2MP61769 119 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 DEFA6Q01524 100 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 RPL7L1Q6DKI1 246 aaKnown RBP10.98□□□□□ -0.65
CNN1-208ENST00000588935 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 HSD17B11Q8NBQ5 300 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 NEURL2Q9BR09 285 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 ARV1Q9H2C2 271 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 PFDN2Q9UHV9 154 aa10.98□□□□□ -0.65
CNN1-208ENST00000588935 ZNF98A6NK75 572 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 C17orf112F2Z3M2 114 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 DNASE2O00115 360 aaPredicted RBP10.97□□□□□ -0.65
CNN1-208ENST00000588935 BUB3O43684 328 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 CXCL2P19875 107 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 PRR20EP86478 221 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 PRR20CP86479 221 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 PRR20DP86480 221 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 PRR20BP86481 221 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 PRR20AP86496 221 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 GCSAMLQ5JQS6 135 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 KPRPQ5T749 579 aaPredicted RBP10.97□□□□□ -0.65
CNN1-208ENST00000588935 OR8I2Q8N0Y5 310 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 STXBP6Q8NFX7 210 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 SCRT1Q9BWW7 348 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 SLC25A39Q9BZJ4 359 aaPredicted RBP10.97□□□□□ -0.65
CNN1-208ENST00000588935 DNAJC4Q9NNZ3 241 aa10.97□□□□□ -0.65
CNN1-208ENST00000588935 AURKAIP1Q9NWT8 199 aaPredicted RBP10.97□□□□□ -0.65
CNN1-208ENST00000588935 ZMAT5Q9UDW3 170 aaKnown RBP10.97□□□□□ -0.65
CNN1-208ENST00000588935 CMYA5Q8N3K9 4069 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 TRAV25A0A0B4J276 109 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 HMSDA8MTL9 139 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 PLP1P60201 277 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 ZNF266Q14584 549 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 DEFB121Q5J5C9 76 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 FFAR4Q5NUL3 377 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 C10orf113Q5VZT2 155 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 FAM90A2PQ658T7 463 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 GLMPQ8WWB7 406 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 TMEM37Q8WXS4 190 aa10.96□□□□□ -0.65
CNN1-208ENST00000588935 TRAV5A0A0B4J249 113 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 H3BRN7 92 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 TSPAN4O14817 238 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 SNRPCP09234 159 aaKnown RBP10.95□□□□□ -0.66
CNN1-208ENST00000588935 CD7P09564 240 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 MORN5Q5VZ52 161 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 SIGLEC15Q6ZMC9 328 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 KCNRGQ8N5I3 272 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 SHANK2-AS3Q9BTD1 123 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 UBQLN2Q9UHD9 624 aa10.95□□□□□ -0.66
CNN1-208ENST00000588935 A0A0D9SG52 128 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 HELTA6NFD8 242 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 C1QBP02746 253 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 ATP6V0CP27449 155 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 CD81P60033 236 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 PAFAH1B2P68402 229 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 PXDC1Q5TGL8 231 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 TMUB2Q71RG4 321 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 ARPC5LQ9BPX5 153 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 SLC25A32Q9H2D1 315 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 CYTL1Q9NRR1 136 aa10.94□□□□□ -0.66
CNN1-208ENST00000588935 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
CNN1-208ENST00000588935 K7EIL1 84 aa10.93□□□□□ -0.66
CNN1-208ENST00000588935 TAAR5O14804 337 aa10.93□□□□□ -0.66
CNN1-208ENST00000588935 PFDN1O60925 122 aa10.93□□□□□ -0.66
CNN1-208ENST00000588935 EIF3GO75821 320 aaKnown RBP eCLIP10.93□□□□□ -0.66
CNN1-208ENST00000588935 S100A7P31151 101 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms