RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 KRTAP24-1Q3LI83 254 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 S100A7AQ86SG5 101 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 OR4F5Q8NH21 305 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 UBE2E2Q96LR5 201 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 OR5B12Q96R08 314 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 DNHD1Q96M86 4753 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 CXorf1O96002 111 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 TRBV12-3P01733 135 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 IQCF2Q8IXL9 164 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 SPATA3Q8NHX4 192 aa17.19■□□□□ 0.34
ATG4D-209ENST00000588857 PEF1Q9UBV8 284 aaKnown RBP17.19■□□□□ 0.34
ATG4D-209ENST00000588857 C8orf88P0DMB2 117 aa17.18■□□□□ 0.34
ATG4D-209ENST00000588857 KHDC3LQ587J8 217 aa17.18■□□□□ 0.34
ATG4D-209ENST00000588857 TOMM20LQ6UXN7 152 aa17.18■□□□□ 0.34
ATG4D-209ENST00000588857 CITED4Q96RK1 184 aa17.18■□□□□ 0.34
ATG4D-209ENST00000588857 MRPL27Q9P0M9 148 aaKnown RBP17.18■□□□□ 0.34
ATG4D-209ENST00000588857 RAB19A4D1S5 217 aa17.17■□□□□ 0.34
ATG4D-209ENST00000588857 BMPR1BO00238 502 aa17.17■□□□□ 0.34
ATG4D-209ENST00000588857 ARL14EPLP0DKL9 152 aa17.17■□□□□ 0.34
ATG4D-209ENST00000588857 GGCTO75223 188 aaKnown RBP17.16■□□□□ 0.34
ATG4D-209ENST00000588857 LGALS1P09382 135 aaKnown RBP17.16■□□□□ 0.34
ATG4D-209ENST00000588857 USF2Q15853 346 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-209ENST00000588857 SLC25A39Q9BZJ4 359 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-209ENST00000588857 OR7C2O60412 319 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 S100A7P31151 101 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 MORN5Q5VZ52 161 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 PQLC2Q6ZP29 291 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 TMPRSS5Q9H3S3 457 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 GNG13Q9P2W3 67 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 RABAC1Q9UI14 185 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 TRAV5A0A0B4J249 113 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 IFNA1P01562 189 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 PSMB3P49720 205 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 KHDC1LQ5JSQ8 128 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 WIPF2Q8TF74 440 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-209ENST00000588857 FAM210AQ96ND0 272 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 SLC25A2Q9BXI2 301 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 EIF5A2Q9GZV4 153 aaKnown RBP17.15■□□□□ 0.34
ATG4D-209ENST00000588857 ZFAND3Q9H8U3 227 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 RNF114Q9Y508 228 aa17.15■□□□□ 0.34
ATG4D-209ENST00000588857 HAX1O00165 279 aa17.14■□□□□ 0.33
ATG4D-209ENST00000588857 PPT1P50897 306 aa17.14■□□□□ 0.33
ATG4D-209ENST00000588857 GUK1Q16774 197 aa17.14■□□□□ 0.33
ATG4D-209ENST00000588857 TCTEX1D4Q5JR98 221 aa17.14■□□□□ 0.33
ATG4D-209ENST00000588857 EIF4E3Q8N5X7 224 aaKnown RBP17.14■□□□□ 0.33
ATG4D-209ENST00000588857 ZNF414Q96IQ9 312 aa17.14■□□□□ 0.33
ATG4D-209ENST00000588857 IGHV3OR16-8A0A075B7F1 116 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 CLPSL1A2RUU4 121 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 NDUFA4O00483 81 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 GCHFRP30047 84 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 CDX1P47902 265 aaPredicted RBP17.13■□□□□ 0.33
ATG4D-209ENST00000588857 HAGHQ16775 308 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 STXBP6Q8NFX7 210 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 FAM167A-AS1Q96KT0 104 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 SHANK2-AS3Q9BTD1 123 aa17.13■□□□□ 0.33
ATG4D-209ENST00000588857 RBFOX3A6NFN3 312 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 ATP6V1G1O75348 118 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 TOR2AQ5JU69 321 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 UQCC3Q6UW78 93 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 C20orf24Q9BUV8 137 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 SCRT1Q9BWW7 348 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 RNF24Q9Y225 148 aa17.12■□□□□ 0.33
ATG4D-209ENST00000588857 H3BRN7 92 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 PMS2P11Q13670 270 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 PEA15Q15121 130 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 LEMD1Q68G75 181 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 PAXXQ9BUH6 204 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 MANBALQ9NQG1 85 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 TMEM167BQ9NRX6 74 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 METTL26Q96S19 204 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 OR51M1Q9H341 326 aa17.11■□□□□ 0.33
ATG4D-209ENST00000588857 STAB1Q9NY15 2570 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 I3L521 148 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 OR10J4P0C629 311 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 BCL2P10415 239 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 UBE2L3P68036 154 aaKnown RBP17.1■□□□□ 0.33
ATG4D-209ENST00000588857 SRSF3P84103 164 aaKnown RBP17.1■□□□□ 0.33
ATG4D-209ENST00000588857 RPEL1Q2QD12 228 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 FAM106AQ4KMX7 169 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 C4orf3Q8WVX3 66 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 WFDC12Q8WWY7 111 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 ZNF503Q96F45 646 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 RARRES2Q99969 163 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 TMEM231Q9H6L2 316 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 TREM1Q9NP99 234 aa17.1■□□□□ 0.33
ATG4D-209ENST00000588857 ZNF320A2RRD8 509 aa17.09■□□□□ 0.33
ATG4D-209ENST00000588857 ZNF98A6NK75 572 aa17.09■□□□□ 0.33
ATG4D-209ENST00000588857 HSPB1P04792 205 aaKnown RBP17.09■□□□□ 0.33
ATG4D-209ENST00000588857 CD28P10747 220 aa17.09■□□□□ 0.33
ATG4D-209ENST00000588857 NPPCP23582 126 aa17.09■□□□□ 0.33
ATG4D-209ENST00000588857 TAGLN2P37802 199 aaKnown RBP17.09■□□□□ 0.33
ATG4D-209ENST00000588857 PROK1P58294 105 aa17.09■□□□□ 0.33
ATG4D-209ENST00000588857 LOC102723971A0A1B0GUV8 181 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 PYYP10082 97 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 ZNF506Q5JVG8 444 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 UNQ9165/PRO28630Q6UXU0 137 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 GPHB5Q86YW7 130 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 C11orf44Q8N8P7 122 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 KLHL30-AS1Q8NEE0 82 aa17.08■□□□□ 0.32
ATG4D-209ENST00000588857 NARS2Q96I59 477 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms