RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 ARL3P36405 182 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 TAS2R60P59551 318 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 PMS2P11Q13670 270 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 CCDC140Q96MF4 163 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 MAP1LC3BQ9GZQ8 125 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 KLK15Q9H2R5 256 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 MLXQ9UH92 298 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 WI2-2373I1.2A0A1W2PRP0 233 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 BMPR1BO00238 502 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 IFNA1P01562 189 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 IGHV3-23P01764 117 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 ORM2P19652 201 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 PSMB3P49720 205 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 KHDC3LQ587J8 217 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 PQLC2Q6ZP29 291 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 ZNF491Q8N8L2 437 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 OR5AU1Q8NGC0 362 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 MYOZ3Q8TDC0 251 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 PCNPQ8WW12 178 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 RNF125Q96EQ8 232 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 TCEAL7Q9BRU2 100 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 SMDT1Q9H4I9 107 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 PEF1Q9UBV8 284 aaKnown RBP8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 HIGD1AQ9Y241 93 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 S4R3C0 116 aa8.2□□□□□ -1.1
NEDD4L-224ENST00000588712 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 GGCTO75223 188 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 IL4P05112 153 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 S100A9P06702 114 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 STAG3L2P0CL84 134 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 STAG3L3P0CL85 134 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 C8orf88P0DMB2 117 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 LYZP61626 148 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 UQCC3Q6UW78 93 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 LCN15Q6UWW0 184 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 TMEM37Q8WXS4 190 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 SLC25A22Q9H936 323 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 GNB4Q9HAV0 340 aa8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 SEPSECSQ9HD40 501 aaKnown RBP8.19□□□□□ -1.1
NEDD4L-224ENST00000588712 ADMP35318 185 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 CDX1P47902 265 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 ZNF726P1Q15940 193 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 C21orf62-AS1Q17RA5 79 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 GCSAMLQ5JQS6 135 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 LINC00305Q7Z4B0 112 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 CHRDL1Q9BU40 450 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 MRPL27Q9P0M9 148 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 PUS1Q9Y606 427 aaKnown RBP eCLIP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 SETXQ7Z333 2677 aaKnown RBP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 NDUFA4O00483 81 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 DEFA5Q01523 94 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 KIAA0141Q14154 515 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 PEA15Q15121 130 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 RNF212Q495C1 297 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 LBHQ53QV2 105 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 NIT2Q9NQR4 276 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 RABAC1Q9UI14 185 aa8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
NEDD4L-224ENST00000588712 CLPSL1A2RUU4 121 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 RPLP1P05386 114 aaKnown RBP8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 LGALS1P09382 135 aaKnown RBP8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 RAB4AP20338 218 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 FAM106AQ4KMX7 169 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 ATRAIDQ6UW56 229 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 PATE2Q6UY27 113 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 NARS2Q96I59 477 aaKnown RBP8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 TXNDC17Q9BRA2 123 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 MANBALQ9NQG1 85 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 DOK5Q9P104 306 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 F8P00451 2351 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 FAM74A7A6NL05 159 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 IGHV3-11P01762 117 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 FAM74A3Q4VXF1 159 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 TOMM20LQ6UXN7 152 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
NEDD4L-224ENST00000588712 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 COTL1Q14019 142 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 MIR17HGQ75NE6 70 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 WIPF2Q8TF74 440 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 TMEM190Q8WZ59 177 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 GPR82Q96P67 336 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 METTL26Q96S19 204 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 SHANK2-AS3Q9BTD1 123 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 SLC25A39Q9BZJ4 359 aaPredicted RBP8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 EIF5A2Q9GZV4 153 aaKnown RBP8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 RNF114Q9Y508 228 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 ARL2-SNX15V9GYD0 113 aa8.16□□□□□ -1.1
NEDD4L-224ENST00000588712 A0A1B0GV90 55 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 RBFOX3A6NFN3 312 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 PPP5D1E7EU14 171 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 UBE2CO00762 179 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 OR7C2O60412 319 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 ARL14EPLP0DKL9 152 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 NPPCP23582 126 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 FGF8P55075 233 aaPredicted RBP8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 GUK1Q16774 197 aa8.15□□□□□ -1.1
NEDD4L-224ENST00000588712 C1orf194Q5T5A4 169 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 324.3 ms