RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 FABP1P07148 127 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 OR10J4P0C629 311 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 RD3LP0DJH9 198 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 PYYP10082 97 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 PPIFP30405 207 aaKnown RBP7.9□□□□□ -1.14
APOC1-201ENST00000586638 TPPP2P59282 170 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 TAS2R45P59539 299 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 CLEC19AQ6UXS0 136 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 RBMS3Q6XE24 437 aaKnown RBP7.9□□□□□ -1.14
APOC1-201ENST00000586638 LCNL1Q6ZST4 164 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 NECAP1Q8NC96 275 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 OR51G1Q8NGK1 321 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 ZNF414Q96IQ9 312 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 JMJD8Q96S16 334 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 ZNF702PQ9H963 129 aa7.9□□□□□ -1.14
APOC1-201ENST00000586638 IGHV3-35A0A0C4DH35 117 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 DNAJC9-AS1A6NH13 148 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 FAM223BA6NKX1 122 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 C11orf94C9JXX5 98 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 H3BRN7 92 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 SCGB2A1O75556 95 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 PF4V1P10720 104 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 ADMP35318 185 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 HILS1P60008 231 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 CD81P60033 236 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 YPEL3P61236 119 aaPredicted RBP7.89□□□□□ -1.15
APOC1-201ENST00000586638 UBE2L3P68036 154 aaKnown RBP7.89□□□□□ -1.15
APOC1-201ENST00000586638 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
APOC1-201ENST00000586638 CFHR3Q02985 330 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 ATP5G2Q06055 141 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 PMS2P11Q13670 270 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 FAM90A2PQ658T7 463 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 LEMD1Q68G75 181 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 C10orf99Q6UWK7 81 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 PQLC2Q6ZP29 291 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 FAM223AQ8IWN6 122 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 OR4F5Q8NH21 305 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 RNF125Q96EQ8 232 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 OR4F4Q96R69 305 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 SMDT1Q9H4I9 107 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 GNB4Q9HAV0 340 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 NBEAL2Q6ZNJ1 2754 aa7.89□□□□□ -1.15
APOC1-201ENST00000586638 TENM1Q9UKZ4 2725 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 ELOA3CA0A087WX78 387 aaPredicted RBP7.88□□□□□ -1.15
APOC1-201ENST00000586638 WI2-2373I1.2A0A1W2PRP0 233 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 PPP5D1E7EU14 171 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 H3BUA1 57 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 IGHV3-11P01762 117 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 CTSGP08311 255 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 FCGR2BP31994 310 aaPredicted RBP7.88□□□□□ -1.15
APOC1-201ENST00000586638 TAGLN2P37802 199 aaKnown RBP7.88□□□□□ -1.15
APOC1-201ENST00000586638 USF2Q15853 346 aaPredicted RBP7.88□□□□□ -1.15
APOC1-201ENST00000586638 SOHLH1Q5JUK2 328 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 CST9LP1Q5W188 147 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 ZNF491Q8N8L2 437 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 TXN2Q99757 166 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 PAXXQ9BUH6 204 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 SLC25A39Q9BZJ4 359 aaPredicted RBP7.88□□□□□ -1.15
APOC1-201ENST00000586638 PRSS22Q9GZN4 317 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 NPFFR1Q9GZQ6 430 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 TMEM167BQ9NRX6 74 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 ZNF580Q9UK33 172 aa7.88□□□□□ -1.15
APOC1-201ENST00000586638 IGHV3OR16-8A0A075B7F1 116 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 SCO2A0A1W2PP80 73 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 FAM74A7A6NL05 159 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 NUPL2O15504 423 aaKnown RBP7.87□□□□□ -1.15
APOC1-201ENST00000586638 TGOLN2O43493 480 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 OR2C1O95371 312 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 TRBV12-3P01733 135 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 SNRPCP09234 159 aaKnown RBP7.87□□□□□ -1.15
APOC1-201ENST00000586638 GP9P14770 177 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 ZNF674Q2M3X9 581 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 AWAT1Q58HT5 328 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 ZNF329Q86UD4 541 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 SVBPQ8N300 66 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 RPUSD4Q96CM3 377 aaKnown RBP7.87□□□□□ -1.15
APOC1-201ENST00000586638 FXYD5Q96DB9 178 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 SHANK2-AS3Q9BTD1 123 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 ZNF747Q9BV97 191 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 NKX6-2Q9C056 277 aaPredicted RBP7.87□□□□□ -1.15
APOC1-201ENST00000586638 OR51M1Q9H341 326 aa7.87□□□□□ -1.15
APOC1-201ENST00000586638 MRPL27Q9P0M9 148 aaKnown RBP7.87□□□□□ -1.15
APOC1-201ENST00000586638 PUS1Q9Y606 427 aaKnown RBP eCLIP7.87□□□□□ -1.15
APOC1-201ENST00000586638 H3BTX0 84 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 CLEC3BP05452 202 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 FOXL1Q12952 345 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 PRR31Q5SQ13 230 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 SHISA2Q6UWI4 295 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 ZNF600Q6ZNG1 722 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 TMEM86BQ8N661 226 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 CLRN3Q8NCR9 226 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 Q8WTZ3 238 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 BLNKQ8WV28 456 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 C20orf24Q9BUV8 137 aa7.86□□□□□ -1.15
APOC1-201ENST00000586638 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms